LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu2g01464	ATGAGTGAACTTCTTTTTGATGATATTTTCAAGGTTGAAGATGTAGATCCTGATGGTAAAAAGTATGACAAGGCATTGGAAGACCAAGTTGATAAGATGTCTAAGGAGGAGAACATGCTAATTGGTGGGGCAACAACTAAGTCTGTTGATTGTACTGATGCATTTAACACTATAGAGGTTTTTCCTTCTCGAGATGCAATGTTAAATTGGGCACGAGATGTTGCAAAAGAGAATGGTTTTGTCCTTATTATTTTGAGATCAGAGACATCTACAAAGCCTACAAGAACTATAAGACGTAATCAAAGGAAGACATTTGTAATTTTGGGTTGCGATAGAAGTGGAAAATATAGGGGACCATACAAGAATGCATTATCCAGAAAGGTAAATGGTTCTAGAAAATGTGAGTGTCCCTTCAGGTTAAGGGGAAAAGCTTTGAAAAAGGCTGAAGGATGGATTGTTAAGGTAATGTGTGGTTTTCACAACCATGACTTAGAGGAAACATTAGTGGGTCATCCATATGCAGGTCGGTTGAGTGCTGAAGAGAAGTCTTTGGTTGATGATATGACAAAGAACATGATGAAGCCAAAAGATATACTATTGACATTGAAAGATTATAACATGGATAATGTCACTACTATCAAGCAGATTTACAATGCCCGACAGGCTTATCGATCCTCTCAAAAAGGTTTAGAAATGCAATACCTATTGAAATTATTGGAAAGTGAGCGGTATGTGTACTGGCATAGAAAGGTGGATGATTCCAATGCTATCAGAGATATATTTTGGACACATCCAGATGCTATTAAACTTCTAGGTGCTTTCAATACTGTCTTGATAATTGGTAGTATTTATACAACCACTAGGTATCCATTGCCATTGCTTGAGATTGTTGGTGTTACTTCAACAGAGTTGACATTCTCTGTGGCATTTGCTTTTGTGGAGTCGGAACGAGCTGACAACTTCACTTGGGCACTACAGAAGTTAAGGGGATTGATTGTTAAAGATGAAGACATACCTCAAGTGATTGTGACTGATAGAGACATTTCTTTGATGAATGCAGTGCAAGTTGTCTTTCCGAGCTCTTCTAATTTGTTATGTCGGTTTCATATCGACAAGAATGTGAAGGCCAAATGCATGTCAATAGTTCATCCAAAGGAGAAACAAGACTTGGTGATGGATGCATGGGATGTTGTTGTGAATTCTTCTAATGAGAGTGAATATATGCAACGTCTGGCATTATTTGAAAAAGTTTGCTCAGGTTTTCCTAGTTTTGGTGAATATGTGAAAAATATGTGGCTGATTCCACACAAGGAAAAATTTGTCACTTCATGGACAAATCAGGTGATGCATTTGGGTAACACAACAACCAATAGGGTTGAGGTAACAAATTGTAAGTTAAGGAATTTGCTTCAAGATAGCAAGGAAGATATGTGTAGTTATTGGGATGCTATGAATGACATGATTACTTTGCAACACAGAGAGATTAAGGCGTCATTTGAGAAAAGCGTAAATGTAGTGGATCATATGCATAATACACCATTATACATCAAACTGCTAGGATTTGTATCAAGAAGTGCATTGAGTCATATAACTGATGAGTATGACCGAGTTAAGACTGTTGGTATTGATATTTCTAAATGTTGTTGCATAGTTAGAACTACACATGGTCTTCCTTGTGCATGTGAACTTGCTAGGTACAGTACAATGTGTCATCCTATTCCCTTGGAGGCAATTCACGTTCACTGGAGGAAGTTAAACATTATTGACCGAGGAATGAATGACAAGGAGTCTGAGTTATCGTTGCAACCTGAATTGGATGCTCTGCTCAAGCGATTTCAGGAACTTGATTGTGCTGGGAAAATTATTCTAAAGGCTAAATTGCATGAACTAGCATTTCCAGATGCAACTTCAAAGTGTCCAACTCCCAAAGAGGTAAAAATAAAGGGTGCTCCAAGGTCAAAAAGAGACAGATCAATTCCTTGTGATCTTTCACATCGGGAGCATGTTGATGCAATGCGTCCTATACATAGTGGCACTTCATCTCATCAACTAGTCCATGAGTCGAAAAGAAGGAGAATTCTGCCAATGATGGATCAATTTCCAATTCAGATCCATCCATTTATTGAAGAAATTATCGATGTTAAAGCAGATTCAAATTGTGGTTATCGTGCTGTTGCAGCTCAACTTGGTATGGGTGAGGAATCATGGGCTTTAGTTCGTCAGGACTTGATTAGAGAGCTTCAGCAATGGCAAGATATTTACGCCAAACTCTTTGGTAGCAATGATCGAGTGGCTGAACTGAAGCAATCTTTGTATGTTGACAAGGAGACATCTAGTAAAAAGTGGATGACCATACCAGATATGGGTTATGTAATTGCCTCAAGATATAACGTTGTTCTAGTCACTTTATCCTTGAAGGAGTCCATGACATTTTTCCCTCTTAGAGGACGACCACCATTATCTCAGTCAAGGCACCGCCTTATTACCATTGGGTTGGTGCATGATTGTCACTTTGTACAGGTTGTTTTGAAGGCTGAGTCTGCATTACCTCCGACTGCTTTGCAGTGGTCAAGATATTGCAGTGCTGAATCCTGTTCTTGGGAAACTTCATATGTTAATCGTATGGAACATTTTAGGTCATTGTTTCCAAAAAAAAATCATGATGTAAATGTTATTGGGGATTAA	2685	0.384	MSELLFDDIFKVEDVDPDGKKYDKALEDQVDKMSKEENMLIGGATTKSVDCTDAFNTIEVFPSRDAMLNWARDVAKENGFVLIILRSETSTKPTRTIRRNQRKTFVILGCDRSGKYRGPYKNALSRKVNGSRKCECPFRLRGKALKKAEGWIVKVMCGFHNHDLEETLVGHPYAGRLSAEEKSLVDDMTKNMMKPKDILLTLKDYNMDNVTTIKQIYNARQAYRSSQKGLEMQYLLKLLESERYVYWHRKVDDSNAIRDIFWTHPDAIKLLGAFNTVLIIGSIYTTTRYPLPLLEIVGVTSTELTFSVAFAFVESERADNFTWALQKLRGLIVKDEDIPQVIVTDRDISLMNAVQVVFPSSSNLLCRFHIDKNVKAKCMSIVHPKEKQDLVMDAWDVVVNSSNESEYMQRLALFEKVCSGFPSFGEYVKNMWLIPHKEKFVTSWTNQVMHLGNTTTNRVEVTNCKLRNLLQDSKEDMCSYWDAMNDMITLQHREIKASFEKSVNVVDHMHNTPLYIKLLGFVSRSALSHITDEYDRVKTVGIDISKCCCIVRTTHGLPCACELARYSTMCHPIPLEAIHVHWRKLNIIDRGMNDKESELSLQPELDALLKRFQELDCAGKIILKAKLHELAFPDATSKCPTPKEVKIKGAPRSKRDRSIPCDLSHREHVDAMRPIHSGTSSHQLVHESKRRRILPMMDQFPIQIHPFIEEIIDVKADSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDIYAKLFGSNDRVAELKQSLYVDKETSSKKWMTIPDMGYVIASRYNVVLVTLSLKESMTFFPLRGRPPLSQSRHRLITIGLVHDCHFVQVVLKAESALPPTALQWSRYCSAESCSWETSYVNRMEHFRSLFPKKNHDVNVIGD*	895

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu2g01464	894	ProSiteProfiles	OTU domain profile.	709	844	IPR003323	-
	Lapu2g01464	894	PANTHER	SWIM-TYPE DOMAIN-CONTAINING PROTEIN	60	473	-	-
	Lapu2g01464	894	CDD	OTU	710	838	-	-
	Lapu2g01464	894	Pfam	MULE transposase domain	278	373	IPR018289	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu2g01464	Lapu-Chr2	27688897	27705994	Dispersed/Proximal

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Lapu2g01464		MULE	1e-20	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu2g01464	-		-	gmx:100805365	1414.82