Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01456 ATGGCGGGCGGCGGAAGTGGGGACCGGCCGCCGTGGAAGGAGGCGGCGCCTCCTCGACCCACCATCAGTCTCCCTCCAAGGGCTGCTTCCATGGAGACCCTTTTCAATGGCGGTTTCAGCCCTGGTCCCATGACTCTTCTCTCTGGCTTTCTGAATGATGGGGATGACTGCAACAAGTCCTTTTCTCAGCTCCTCGCCGGAGCCATGGCTTCTCCGGTGGCCGCCGCCGCCGTGCACGATTCACCTGGCCTCTTTTCACCTTCTCAGGTGTCTTTTGGAATGACACACCAGCAGGCTCTAGCTCAAGTTTCAGTTCAAGCTGAACATTCATTGTCTGTATCAGTATCATCAGCTACCTCATTCACACAGGTTTCTGCAGCTACTTCCAATGCTACACAACAGCTGATACCACCCTTAACTGCAGACACTTGGACCACAATGACCGAATCCACTGATCATTCTCACTTTGAACAAAAATTGCAATCTTCATCACTGAATGTTGACAAGCCTGCGGATGATGGCTACAACTGGAGGAAGTACGGACAGAAACAGGTGAAGGGTAGTGAATTTCCTCGAAGTTATTACAAATGCACGCATCCACAATGTCCTGTCAAGAAAAAGGTTGAGCGTTCACTTGAGGGTCATGTAACTGCAATTATTTATAAAGGAGAACACAACCATCAACGTCCTCATCCTAACAAGCGCTCCAAAGATGCTGTGACTTCAAATGAAAATTCAAATATGCAAGGGATGACTAAGATGGATCCAGAGTCAAGTCAGGCAACAGCTGATCATCTATCAGGAAGTGACAGTGAGGAAGTAGGTGATCATGAAGCTGAAGTGGATGAGAAAAATGTTGAGCCTGACCCCAAGAGGAGTAAAACAGAAATCACAAATTTGGATCCAGCATCTTCACACAGGACAGTCACTGAGCCTAGAATCATTGTACAAACAACAAGTGAAGTTGATCTTTTAGATGATGGTTACAGATGGCGAAAATATGGGCAGAAAGTTGTCAAAGGCAACCCTTATCCGAGGAGCTATTACAAATGTACAACCACAGGTTGTAAGGTCCGAAAGCATGTAGAGAGGGCTTCAACAGATCCTAAAGCTGTCATAACAACATATGAAGGAAAACACAATCATGATGTTCCAGCAGCAAAGACCAACAGCCACATTATGGCCAGTAACACTTCACAGATAAGATCACAGAATTCCAATTCTGGAAACCATAATTTTGGAAGCAGAGATAATGGTGGCAATGAACAACAGCCGGTTGCACGGCTACGGTTGAAGGAAGAGCAGATAACCTAG 1314 0.4658 MAGGGSGDRPPWKEAAPPRPTISLPPRAASMETLFNGGFSPGPMTLLSGFLNDGDDCNKSFSQLLAGAMASPVAAAAVHDSPGLFSPSQVSFGMTHQQALAQVSVQAEHSLSVSVSSATSFTQVSAATSNATQQLIPPLTADTWTTMTESTDHSHFEQKLQSSSLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPQCPVKKKVERSLEGHVTAIIYKGEHNHQRPHPNKRSKDAVTSNENSNMQGMTKMDPESSQATADHLSGSDSEEVGDHEAEVDEKNVEPDPKRSKTEITNLDPASSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTTGCKVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHIMASNTSQIRSQNSNSGNHNFGSRDNGGNEQQPVARLRLKEEQIT* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01456 437 MobiDBLite consensus disorder prediction 221 308 - -
Lapu2g01456 437 SMART WRKY_cls 325 384 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu2g01456 437 SMART WRKY_cls 171 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu2g01456 437 MobiDBLite consensus disorder prediction 400 422 - -
Lapu2g01456 437 FunFam WRKY transcription factor 33 312 378 - -
Lapu2g01456 437 Gene3D WRKY domain 157 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu2g01456 437 Gene3D WRKY domain 310 386 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu2g01456 437 MobiDBLite consensus disorder prediction 1 24 - -
Lapu2g01456 437 SUPERFAMILY WRKY DNA-binding domain 317 385 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu2g01456 437 ProSiteProfiles WRKY domain profile. 320 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu2g01456 437 FunFam WRKY transcription factor 158 231 - -
Lapu2g01456 437 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 84 409 IPR044810 GO:0003700
Lapu2g01456 437 MobiDBLite consensus disorder prediction 269 296 - -
Lapu2g01456 437 MobiDBLite consensus disorder prediction 221 238 - -
Lapu2g01456 437 MobiDBLite consensus disorder prediction 239 267 - -
Lapu2g01456 437 Pfam WRKY DNA -binding domain 172 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu2g01456 437 Pfam WRKY DNA -binding domain 326 383 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu2g01456 437 ProSiteProfiles WRKY domain profile. 172 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu2g01456 437 MobiDBLite consensus disorder prediction 400 437 - -
Lapu2g01456 437 SUPERFAMILY WRKY DNA-binding domain 169 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01456 Lapu-Chr2 27590741 27596022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01456 19 437 WRKY Transcription Factor Family AT2G03340 50.292 3.64e-136 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu2g01456 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01456 - - gmx:100127369 725.317