Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01449 ATGGGTGCAGATGTGACACATCCTCACCCTCTTGATGATTCCAGTCCATCTGTTGCTGCGGTTGTTGGTAGCATGAATTGGCCAACAGCAAACAAATACATTTCAAGAATAAGTCTCAGACAGAGACAAGAAATCATTCAGGATCTTGGTGCAATGGTGGGGGAATTGCTTGATTATTTTTACCAGGAGGTAGAGAAACTCCCCAGCAGAATCATTTTCTTCAGAGATGGGATTGGTGAAACTCAGTTTTACAAAGTTTTGGAAGACGAACTTCAGTCAATCAGGTGTACCAAGCCAATTTCTTTGGTGCCTCCTGCATATTACGCCCATTTAGCTGCATACCGAGGCAGACTCTACCTTGGGAGATCAGAGTCCATAGGTTTGTTCAGAAGTACATCTACACTATCCAGAGCTGCTCCTCCAAAGACACCACCTCTACCTAAACTCAGTGAAAACATCAAGAAGCTCATGTTCTACTGCTAG 483 0.4389 MGADVTHPHPLDDSSPSVAAVVGSMNWPTANKYISRISLRQRQEIIQDLGAMVGELLDYFYQEVEKLPSRIIFFRDGIGETQFYKVLEDELQSIRCTKPISLVPPAYYAHLAAYRGRLYLGRSESIGLFRSTSTLSRAAPPKTPPLPKLSENIKKLMFYC* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01449 160 Gene3D - 1 93 IPR036397 GO:0003676
Lapu2g01449 160 SUPERFAMILY Ribonuclease H-like 1 95 IPR012337 -
Lapu2g01449 160 Gene3D - 94 160 IPR036397 GO:0003676
Lapu2g01449 160 ProSiteProfiles Piwi domain profile. 1 95 IPR003165 GO:0003676
Lapu2g01449 160 Pfam Piwi domain 1 95 IPR003165 GO:0003676
Lapu2g01449 160 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 95 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01449 Lapu-Chr2 27443006 27443818 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01449 1 95 Eukaryotic Initiation Factors Gene Family AT1G48410 49.541 8.49e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01449 K11593 - gmx:100797755 170.629