Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01436 ATGGAGAGCAGAACAAGCTCTGTGCTCCCACCTGGCTTCAGGTTTCACCCCACTGACGAGGAACTAATCGTGTACTACCTTTGTAACCAAGCCACATCAAAACCATGCCCTGCATCAATCATTCCAGAAGTGGATATCTATAAGTTTGATCCATGGGAATTACCTGAAAAAACAGACTTTGGAGAAAATGAATGGTACTTCTTTAGCCCAAGAGAGAGGAAGTACCCAAATGGGGTGAGGCCTAATAGAGCAACTGTGTCTGGGTATTGGAAGGCCACTGGCACTGACAAAGCAATCTATAGTGGCTCTAAGCATATTGGGGTGAAGAAAGCCTTGGTTTTTTACAAGGGTAAGCCACCAAAGGGTCTCAAGACAGATTGGATTATGCATGAGTATAGATTAATAGGATCAAGAAGACAAGCCAATAGACAAATTGGGTCCATGAGGCTAGATGACTGGGTCTTGTGTAGGATCTACAAGAAGAAGAACATAGGAAAATCATTGGAGGCAAAAGAGGACTACCCAATTGCACAAATCAATCTTACACCACCAAATAATGGCACTGAACAAGAAGTGGTGAAATTTCCAAGGACTAGTTCCCTTACTCATCTTTTGGATATGGATTACTTGGGTCCAATATCACACATACTATCTGATGCATCGTACACTTCAACCTTTGATTTTCAACTTAACACTGCCAATAGTGGAATGGACCCGTTCTTAAAACCACAGCCACTTGAAATTCCCAATAACTCTTATGCAGCAGATTCAGGGAAGTACCAAGTGAAACAGAACAGCACCATCAACCCCACTATATTTGTGAATCATGTCTATGATCAGAGAGGATAA 849 0.4205 MESRTSSVLPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDIYKFDPWELPEKTDFGENEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHIGVKKALVFYKGKPPKGLKTDWIMHEYRLIGSRRQANRQIGSMRLDDWVLCRIYKKKNIGKSLEAKEDYPIAQINLTPPNNGTEQEVVKFPRTSSLTHLLDMDYLGPISHILSDASYTSTFDFQLNTANSGMDPFLKPQPLEIPNNSYAADSGKYQVKQNSTINPTIFVNHVYDQRG* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01436 282 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
Lapu2g01436 282 FunFam NAC transcription factor 18 165 - -
Lapu2g01436 282 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Lapu2g01436 282 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Lapu2g01436 282 PANTHER NAC TRANSCRIPTION FACTOR 56 9 180 - -
Lapu2g01436 282 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01436 Lapu-Chr2 27222549 27224745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01436 1 216 NAC Transcription Factor Family AT1G69490 68.421 8.99e-116 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu2g01436 NAM 2.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01436 - - gmx:100170717 543.888