Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01427 ATGCCAATGCTGCAACTCTCTCCAGTACACTCCCAATTTTCTTGCTACCACAACCACCCGACAACCTTGGACCGCGGCATCGTGTTCCACGAAAAGGTGCGCTACCTTAAAGCCCTCAAAGTGAACCCGGACAAGGCCTTCCGCTTAAATCCCACACTACGCTCCTCCCCTCTCTCCGTCCTCGAATCCGTCACGCGCTGCCTCTTCTCCCTCGGAGTCCCACGCGCCGCCATGGGGCGCATCCTCGACATGCACCCCGTGCTCCTTACGTGCGATCCCTACTACCATCTCTACCCTCTCCTTGACTTCCTCCTCCATGAAGTTCCAATCCCCTTCCCCGACATCCACCTTTGCATCCTCCGCTGCCCCAGGTTACTCGTTTCCAGCGTCGATAACCAATTGCGTCCCACACTGCTATTTCTCAGGGAATTAGGGTTCTGTGGGGCCCACTCCCTCACGTGCCAGACCACCCTGCTCCTCATGTCCAGCTTGGAGGACACCCTTTTGCCCAAGATTGAGTTTTTGAAAGGTTTGGGGTTCACCCACATCGAGGTCTCGAACATGGTCGTCAGGTCCCCTGGGTTGTTGACTTTAAGCGTGAAGAAGAATTTGGTGCCCAAGGTGGAATTTTTCTTGAATGAGATGAATGGGGATGTTGCTGAGCTCAAGAGGTTCCCTCAGTACTTTTCTTTTAGCTTGGAACGGAGGATTAAGCCGAGATTCGGGATGCTGAGGCGGCTTGGTGTGTCGATGCCGTTGGAAGATATGTTGAAGGTTAGTGATGGCGGGTTTGATGCTATGTTGCTTGAATTGAGGTTTAGGAGTCTTGAGGTTGGAGTAGGACAATAG 849 0.5324 MPMLQLSPVHSQFSCYHNHPTTLDRGIVFHEKVRYLKALKVNPDKAFRLNPTLRSSPLSVLESVTRCLFSLGVPRAAMGRILDMHPVLLTCDPYYHLYPLLDFLLHEVPIPFPDIHLCILRCPRLLVSSVDNQLRPTLLFLRELGFCGAHSLTCQTTLLLMSSLEDTLLPKIEFLKGLGFTHIEVSNMVVRSPGLLTLSVKKNLVPKVEFFLNEMNGDVAELKRFPQYFSFSLERRIKPRFGMLRRLGVSMPLEDMLKVSDGGFDAMLLELRFRSLEVGVGQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01427 282 PANTHER CGI-12 PROTEIN-RELATED 179 266 IPR003690 GO:0003690|GO:0006355
Lapu2g01427 282 SMART mt_12 116 147 IPR003690 GO:0003690|GO:0006355
Lapu2g01427 282 SMART mt_12 150 181 IPR003690 GO:0003690|GO:0006355
Lapu2g01427 282 SMART mt_12 186 218 IPR003690 GO:0003690|GO:0006355
Lapu2g01427 282 SMART mt_12 79 111 IPR003690 GO:0003690|GO:0006355
Lapu2g01427 282 SMART mt_12 219 250 IPR003690 GO:0003690|GO:0006355
Lapu2g01427 282 Pfam mTERF 50 264 IPR003690 GO:0003690|GO:0006355
Lapu2g01427 282 Gene3D Transcription termination factor 3, mitochondrial 30 273 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01427 Lapu-Chr2 27081927 27087906 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lapu2g01427 mTERF 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01427 K15032 - gmx:100785219 441.81