Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01400 ATGAACGTGGATCTGGAGTCATTAGCAGAGGCCACTTCTGGGGCCATAGGATCACTCATCAGCACCGCTATTCTCTACCCACTTGACACCTGCAAGACCAAGTACCAGGCCGATGCTCGTTCCCATGGTCGCACAAGATACAGGAATCTCACTGATGTATTATTGGAGGCAATATCTAACGGTCAGGTGCTTTCACTTTACCAGGGCCTTGGAACAAAGAATCTTCAATCCTTCATTTCGCAGTTTGTCTACTTCTATGGATACAGTTATTTTAAAAGACTGTATCTAGATAAAAGTGGTTATAAATCCATTGGAACCAAAGCAAACTTAGTTATTGCTGCTGCTGCTGGGGCTTGCACTGCTATTGCGACTCAGCCCCTGGACACAGCCTCTTCAAGGATGCAGACAAGTGCATTTGGAAAGTCTAAAGGGCTACTGAAAACTCTGACCGAAGGAACCTGGAGTGACGCATTCGATGGCCTCAGTATTTCCTTGCTGCTGACATCAAACCCTGCAATTCAGTATACCGTGTTTGATCAGCTGAAACAGCGAGCACTGAAGAATAAACAAAACAAAGCTGGTAAAGGAACATCTCCCGAATCCCTTTCTGCATTTATGGCCTTTCTATTAGGTGCAATTTCAAAGAGCATTGCTACATGTCTAACATATCCAGCTATCAGGTGCAAAGTTATCATTCAAGCTGCAGACTCAGATGAAGCAAACTCCAAAACAAAGATAAAATCACAGAAAACAGTCTCTAATGTTCTCTATGGAATATGGAAAAGGGAGGGCATAGTGGGATATTTTAAAGGATTGCATGCTCAGATCTTAAAAACTGTTTTGAGCTCAGCACTGCTCTTAATGATCAAGGAAAAGATCTCTGCTACTACTTGGGTGCTTATACTTGCACTTAAAAGGTATTTATTACTTCCAACGAGAAGGGTTAAGAACTTGTAA 957 0.4242 MNVDLESLAEATSGAIGSLISTAILYPLDTCKTKYQADARSHGRTRYRNLTDVLLEAISNGQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLDKSGYKSIGTKANLVIAAAAGACTAIATQPLDTASSRMQTSAFGKSKGLLKTLTEGTWSDAFDGLSISLLLTSNPAIQYTVFDQLKQRALKNKQNKAGKGTSPESLSAFMAFLLGAISKSIATCLTYPAIRCKVIIQAADSDEANSKTKIKSQKTVSNVLYGIWKREGIVGYFKGLHAQILKTVLSSALLLMIKEKISATTWVLILALKRYLLLPTRRVKNL* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01400 318 Gene3D Mitochondrial carrier domain 6 297 IPR023395 -
Lapu2g01400 318 SUPERFAMILY Mitochondrial carrier 7 292 IPR023395 -
Lapu2g01400 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 296 IPR018108 -
Lapu2g01400 318 Pfam Mitochondrial carrier protein 104 188 IPR018108 -
Lapu2g01400 318 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Lapu2g01400 318 Pfam Mitochondrial carrier protein 202 294 IPR018108 -
Lapu2g01400 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Lapu2g01400 318 FunFam Peroxisomal adenine nucleotide carrier 1 3 297 - -
Lapu2g01400 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Lapu2g01400 318 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 317 IPR045900 GO:0005347|GO:0006635|GO:0015217
Lapu2g01400 318 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Lapu2g01400 318 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Lapu2g01400 318 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01400 Lapu-Chr2 26555761 26559627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01400 27 311 Chloroplast and Mitochondria Gene Families AT1G25380 27.759 3.14e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01400 - - gmx:100787682 565.459