Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01397 ATGGAATTGGAGGCTGATCATCAAAATGGGATCCGAACTAGACCCAATTTCCCTCTGCAGCTGCTAGAGAAAAAGGACGTTGATGACGTCACGGAACAACCTTGTTCCACCACTACCAGGGACAGCGTCGTAACTGCAACTACTGTTACCACTACTTCTGCTACTAATAACAACCTCCACTTGGCGGAGCAGTCCAAAAAGCCCCCGCCTAAGAGGACTTCCACCAAGGACCGCCACACCAAGGTCGATGGCCGAGGCCGCCGGATCCGCATGCCGGCCGCTTGTGCTGCCAGAGTCTTTCAGCTCACGCGTGAGCTCGGGCACAAGTCTGACGGAGAGACCATCGAGTGGCTCCTTCAGCAGGCCGAGCCTGCGGTCATCGCTGCCACCGGCACCGGCACCATTCCCGCCAACTTCACCTCGCTCAACATCTCCCTCCGCAGCTCCGGCTCCACCATGTCGGCGCCGTCTCACTACTTCCGCGGAAACTACTTCAACCCTAGCACGTTCTCCAGCTCAACTGCCGCCGCTGCGGCGGCGGCGCAGCTAAGGAACCGCGCAGAGTGGGACCGGAACATGAGCATGGTGATGGAGGATTCTCGTAGGAGCATGCTGGAGAACACTTCTTCCATCTCCGCGATTTTGAATTTCAACCCTATGGGTAACATCAATGTAATTCAACAAGCGAAACAAGAGCTTCGAGAAGAATCCGGTGGCGGTCTTGAATCGGTGGCTTCGGATTCTGATGGAAGCTTAGGGAGAAAGAGAAGGCCAGAGCAAGAACTATCACAAATGGGAAGCTATTTGATACAATCGAGCACAGGGTCGCTTCCGTCGAGCCACGCTTCCAACACGGCCGCGTTTTGGATGGTGGCGGGTCACGGTAACCAATCCATGAGTGGTGGCGGTGGCGGCGGCGGCGGTGGCAATGGTAACGATAATCCCATTTGGGCAATTCCCTCTGTTGGGAACAGTGGGATGTATAGAGGAGCTATGTCTCCCCCAGGTGGCATTCATTTCATGAATTTTGCTTCTCCGATGTCCCTCATGCCCGGTGGTCAACTAGGTTCCGGTATGGTTGGTGGCGGCGGAGGCGGTAGCGGCGGTGCTCAACTTCTAAGTGAAAGTAACTTAGGCATGCTTGCGGCCATTAATGCCTACAGGCAGATTCCGGCGAACGGCGTCTCGGAGTCCGCGGGAAGCGCGGGACAACCTCACGGCGGAGATGATGGACGTGACTCAAGCAGTCAACATTCCTGA 1260 0.5611 MELEADHQNGIRTRPNFPLQLLEKKDVDDVTEQPCSTTTRDSVVTATTVTTTSATNNNLHLAEQSKKPPPKRTSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRGNYFNPSTFSSSTAAAAAAAQLRNRAEWDRNMSMVMEDSRRSMLENTSSISAILNFNPMGNINVIQQAKQELREESGGGLESVASDSDGSLGRKRRPEQELSQMGSYLIQSSTGSLPSSHASNTAAFWMVAGHGNQSMSGGGGGGGGGNGNDNPIWAIPSVGNSGMYRGAMSPPGGIHFMNFASPMSLMPGGQLGSGMVGGGGGGSGGAQLLSESNLGMLAAINAYRQIPANGVSESAGSAGQPHGGDDGRDSSSQHS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01397 419 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 39 381 IPR005333 GO:0003700
Lapu2g01397 419 Pfam TCP family transcription factor 73 204 IPR017887 -
Lapu2g01397 419 MobiDBLite consensus disorder prediction 65 85 - -
Lapu2g01397 419 MobiDBLite consensus disorder prediction 51 85 - -
Lapu2g01397 419 MobiDBLite consensus disorder prediction 234 263 - -
Lapu2g01397 419 ProSiteProfiles TCP domain profile. 75 129 IPR017887 -
Lapu2g01397 419 MobiDBLite consensus disorder prediction 394 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01397 Lapu-Chr2 26474598 26477616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01397 15 354 TCP Transcription Factor Family AT3G47620 41.192 8.01e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lapu2g01397 TCP 2.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01397 - - vum:124821453 692.189