Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01374 ATGACCTGTGTTCTCCGTAGAATTTCTGACCGACCCAACACAGAACCTCCGTGTTCTTCCGATCAACGAAGCAAAACCCTAACCCTGAACATTACCCAACAAACGTATCCGATCATGGCCTCCGGCGACGGCCATGATTCACTGGGCAAGCACCGCCGCTCCTCTGCTCCGGATGACGCCGACCAATCCTCGAAGCGCCACCGCCACCGCCACCGCCACCGTCGTCACGGAAGCAGAAAACACGACGAAGAAAGTGAACGCGATTTCGAAACCGCCGATTGCGAAACAGCTATGGCGGCTCCTTCTCCGATTCCGCCCCGTAGCTCTGGAACGAATCGTCTCGTTGTCGATGATGACGATGTCGAGGAAGGAGAAATTCTCGAAGAAGACGATGGCGATATCTCGAAGCTAGACGCGCAATCTGATGCTAAGCATGGCGAAACTGGCGTGACCGTAGATCGAGATGTTCGATCCAATAACGCAAATCTGGGACATTTTGTCAGGGGGACTTTGTTGCATGCTAAAGATTTAAAATCTGGAACACAGTGCATTGTTGATGATAAATTTACTAATCCTGATGGCGAAGATGAGGCAAGCCGAAGTAGTCACTTTAGCAGTGGAATACATGAAGATGGTATGGGCAATGGGTTTTTGGATCGGAAGGATGGTAGAGCTAGTACAGATTCTATGGGCAATGGGCTTTTGGATCATAAATATTCGGGAAGGGACACTCGACAAGGTGGGGAATATGAATGTTTTAAGGGAAATGAGAAACATAAAGGTTATTGTGATGACGAGGACGTAGAGCTCGACGGAAGGAAAGTTGGTTACTATAGAATCTCTTCCTCAGAAAGTGGAGGAGAGAAATATAGAAGAAGATTAAGACGGTCACGTTCTCGTAATAGATATAGAAGTCAATCAAGATCAAATGGTCGCGCTAAGGACAGGTCTCGTTCTGGTAGTATTGCAGAAAAACGTGCTCATTCAAAGAAAAAGCACTCTGATGAACAGGGGGATCATTCATATGCTGGTAGAGTTAAGACTGACTATGACCTTGATGATGAAAGAATGATGGCAAGCAGAAGGGATAATAGAAATTTGGTGGACAAAAGAAGGGAACAAAAATCAAGTTATCATGTTCCGGAGGCTTGGGATATGGATAGAGATAGGGATAGGAGTAGGGACAAAGATGTCAAGAAAGACTTCAAGATGGAAAAAGAACAAGAGAGGAGTGGGAATATGGAGGTCGATCGGGTGCTTAGAAGGGAAAAAGACCATGAAAGGAGCCATAAGAGGCATAGAAGGAATGGAGAAGAAGATAGGAGGGAAAGAGAGGATGATAGGGATAGGAGAAGAGAAAAGGAAAGAGATAGGAGCTGTGAGACTGTGTTTGAAAGGGATAGGAAAAGGGAAAAGGAAAGATATCGAAGTAGAGACAGAACAAGGGGTGGTGAGAGAGACAGGGACTGGGAGACTGCTGAACATGATGAAAGGAGTTGGGAAAAAGACAAAAATAAGGAGAGGGAGAGGCGAGATGATAGAAGGAGGCACATGGGTAGAGACGCATCGAATGGCATGGGTAAGTATCTGCCTCGTGAGGATGATTGTGAAAGTCGTGATAGGCATAGAATGCGTTCAAAACAAGAAGAAACAGAATACCACCAAGAAAGGAAAAGGAATTCCTTCCCCGTAAGGGTTTATGATCAAAATGAACTACAGAGAGGGGAGGATGAACAAGATGAGTTAGATGAGAAGATTACATTGCAATCACCTGATCAAGAAGAGGAAGATTTCAATAGGGTTAAAGAAGAGAGTAGAAGGAGAAGGGAGGCAATCTTAGAGAAATACAAGAAGCAGCAGCAACAAGTAGAACAAAATACAGATAACAAAGTAAAAGTGTTAGACAAACAAACTGTAGATATTCCTGCTACCATTCCTGATGTTCTCGATGATGTGGAGGTGGAAACATTATTTTCTGTTAGGAAATCTCCTCTGGAAAATGGAAATGTTGCTTCTGATATGATCTCTGGTGCTGGGGGCCTTGGAGAGGGTACACCTAAGAGTGAAGGAGCTGATGACAAATTTTGTGATGATATATTTGGTGAGACACCAACTGGAGTTCAGAAATCAGGTAAAGGAGAAGGTTTAAGAATTGAGAGGGGTGGCCTACATGACAATTGGGATGATGCAGAGGGTTATTACAGTTATCGTTTTGGTGAAGTACTTGATGGTCGATATGAAGTCATTGCTGCTCATGGAAGAGGTGTCTTTTCAACAGTGGTCCGGGCAAAGAATCTTAAAAATAATAATGGTGAACCTGGAGAAGTTGCCATAAAAATAATTCGTAGTAATGACACAATGTACAAGGCTGGTATGGATGAGTTAGTCATAATAAAGAAATTAGTAGGTGCTGACCCAGATGATAAGCGGCATTGTGTACGCTTCCTTTCAAGTTTCAAGTATAGGAATCACCTTTGTTTAGTTTTTGAATCTCTCCATATGAATCTGCGTGAGGTCTTGAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACTGCAGTTAGAGCGTATGCTAAACAACTTTTTATTGCACTGAAGCATCTCCGGAACTGTGGTGTTCTCCATTGTGATATAAAACCGGATAATATGTTGGTGAATGAGGCTAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAGTTACACCATATCTAGTGAGTCGCTTTTATCGTGCCCCTGAAATCATTCTTGGCTTAACCTATGATCATCCATTGGATATGTGGTCTGTAGGCTGTTGTTTGTATGAGCTCTATACAGGGAAAGTTCTTTTCCCAGGTTCTACTAACAATGACATGCTACGACTCCATATGGAATTGAAGGGCCTTTTTCCTAAAAAGATGCTTAGGAAGGGAGCATTTATTGAACAACATTTTGACCAGGACCTGAATTTTCTTGCTACAGAGGAGGACCCTGTGACGAAAAAGGCAATAAAGCGGATGATTCTCAACATAAAACCAAAAGATATTGGAACAATCATCAGTGGCTCTCTAGGGGAGGATCCAAAGATGTTAGCCAATTTTAAAGATCTTCTGGAAAAGGTTTTTGTATTGGATCCAGACAAGAGGTTGACAGTCTCACAGGCATTGAATCACCCATTCATCACTGGCAAGTGA 3195 0.4304 MTCVLRRISDRPNTEPPCSSDQRSKTLTLNITQQTYPIMASGDGHDSLGKHRRSSAPDDADQSSKRHRHRHRHRRHGSRKHDEESERDFETADCETAMAAPSPIPPRSSGTNRLVVDDDDVEEGEILEEDDGDISKLDAQSDAKHGETGVTVDRDVRSNNANLGHFVRGTLLHAKDLKSGTQCIVDDKFTNPDGEDEASRSSHFSSGIHEDGMGNGFLDRKDGRASTDSMGNGLLDHKYSGRDTRQGGEYECFKGNEKHKGYCDDEDVELDGRKVGYYRISSSESGGEKYRRRLRRSRSRNRYRSQSRSNGRAKDRSRSGSIAEKRAHSKKKHSDEQGDHSYAGRVKTDYDLDDERMMASRRDNRNLVDKRREQKSSYHVPEAWDMDRDRDRSRDKDVKKDFKMEKEQERSGNMEVDRVLRREKDHERSHKRHRRNGEEDRREREDDRDRRREKERDRSCETVFERDRKREKERYRSRDRTRGGERDRDWETAEHDERSWEKDKNKERERRDDRRRHMGRDASNGMGKYLPREDDCESRDRHRMRSKQEETEYHQERKRNSFPVRVYDQNELQRGEDEQDELDEKITLQSPDQEEEDFNRVKEESRRRREAILEKYKKQQQQVEQNTDNKVKVLDKQTVDIPATIPDVLDDVEVETLFSVRKSPLENGNVASDMISGAGGLGEGTPKSEGADDKFCDDIFGETPTGVQKSGKGEGLRIERGGLHDNWDDAEGYYSYRFGEVLDGRYEVIAAHGRGVFSTVVRAKNLKNNNGEPGEVAIKIIRSNDTMYKAGMDELVIIKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLTYDHPLDMWSVGCCLYELYTGKVLFPGSTNNDMLRLHMELKGLFPKKMLRKGAFIEQHFDQDLNFLATEEDPVTKKAIKRMILNIKPKDIGTIISGSLGEDPKMLANFKDLLEKVFVLDPDKRLTVSQALNHPFITGK* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01374 1064 SUPERFAMILY Protein kinase-like (PK-like) 733 1063 IPR011009 -
Lapu2g01374 1064 ProSiteProfiles Protein kinase domain profile. 746 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01374 1064 MobiDBLite consensus disorder prediction 45 65 - -
Lapu2g01374 1064 MobiDBLite consensus disorder prediction 189 204 - -
Lapu2g01374 1064 MobiDBLite consensus disorder prediction 292 307 - -
Lapu2g01374 1064 MobiDBLite consensus disorder prediction 133 152 - -
Lapu2g01374 1064 MobiDBLite consensus disorder prediction 579 605 - -
Lapu2g01374 1064 MobiDBLite consensus disorder prediction 126 156 - -
Lapu2g01374 1064 MobiDBLite consensus disorder prediction 188 247 - -
Lapu2g01374 1064 SMART serkin_6 746 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01374 1064 MobiDBLite consensus disorder prediction 432 564 - -
Lapu2g01374 1064 Pfam Protein kinase domain 747 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01374 1064 PANTHER DUAL SPECIFICITY PROTEIN KINASE 451 1062 - -
Lapu2g01374 1064 Coils Coil 602 629 - -
Lapu2g01374 1064 ProSitePatterns Serine/Threonine protein kinases active-site signature. 873 885 IPR008271 GO:0004672|GO:0006468
Lapu2g01374 1064 MobiDBLite consensus disorder prediction 308 424 - -
Lapu2g01374 1064 MobiDBLite consensus disorder prediction 1 92 - -
Lapu2g01374 1064 FunFam Serine/threonine-protein kinase PRP4 homolog 806 1062 - -
Lapu2g01374 1064 Gene3D Transferase(Phosphotransferase) domain 1 806 1062 - -
Lapu2g01374 1064 CDD STKc_PRP4 745 1061 IPR044092 GO:0004674|GO:0006468|GO:0045292
Lapu2g01374 1064 Gene3D Phosphorylase Kinase; domain 1 717 805 - -
Lapu2g01374 1064 MobiDBLite consensus disorder prediction 282 605 - -
Lapu2g01374 1064 MobiDBLite consensus disorder prediction 13 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01374 Lapu-Chr2 25789956 25804507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01374 699 1063 MAP Kinase Gene Family AT2G18170 30.079 3.73e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lapu2g01374 Pkinase 5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01374 K08827 - gmx:100776908 1098.19