Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01365 ATGAAGATTAGCTGTAATGGGTGTCGCATTCTTCGCAAAGGTTGTACTGAGGACTGTGTGATTAGGCCATGCCTAGAGTGGATAAACTCTTCTGAAGCACAAGCTAATGCTACCCTTTTCCTTTCTAAGTTCTATGGTCGTGCTGGATTGCTCAACCTCATCAATGCTGCCCCACAACACCATCGCACTGCTGTGTTCAAGTCACTGATGTACGAGGCATGTGGGAGGATCATGAACCCAACATATGGGTCAGTTGGGTTGTTTTGGAGTGGTGAGTGGGCCCAGTGCCAAGCTGCTGTTGATGCTGTTTTAGCTGGGTCCGAGATCAATGTGACGACAACTTGCCATGCACAAGTGACAGTGCCACATGGCACTGAGCATGCTTCCAAAGTCCTTGACATACGTCATGTGTCCAGAAATGCAGACATGGACATGGTGAAAGGAAAAGCTAAGAAGCACCAGAGAACTGAGAATGTTATCATGTCAATGTCACATCTGGGTTTGGTCAACTCGGCTACATTATGGGACCCAACTTTAAGCCATGAGCCAAGAGGGTTAGAGCGTGGAAGTGAGGAAATTGTGAAGGCTATGTTGGTGAGCCAGGACAAGCCAAGCATAAATGATGGAGCCAATATTGATTTGGAGCTCACTCTTGGCTAG 660 0.4742 MKISCNGCRILRKGCTEDCVIRPCLEWINSSEAQANATLFLSKFYGRAGLLNLINAAPQHHRTAVFKSLMYEACGRIMNPTYGSVGLFWSGEWAQCQAAVDAVLAGSEINVTTTCHAQVTVPHGTEHASKVLDIRHVSRNADMDMVKGKAKKHQRTENVIMSMSHLGLVNSATLWDPTLSHEPRGLERGSEEIVKAMLVSQDKPSINDGANIDLELTLG* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01365 219 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Lapu2g01365 219 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Lapu2g01365 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01365 Lapu-Chr2 25539371 25540286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01365 1 218 AS2 family AT3G02550 45.690 4.57e-66 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu2g01365 LOB 4.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01365 - - vum:124830139 350.903