Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01345 ATGAAGGAATCCCAAATGATAGAGTCAAGCAGGAATGGCATCATTAGCTGTGTACTACTGCACCTCTTCTTGTTCTTACCATTCATCCATTTAATCACTTGTGATCCAATTAATGTCCCGGATAAAATCCTCCTAAACTGTGGTTCTAATAAAGCATCACCATTCAATGGAGAAAATTGGATAGGAGATGTGGGATCTAATTTCTTGCCACCAGAGTATGACAAGAGTTCATCTCCACTCTTGATCTCGACCATACACTCTCTAGTACCAAAAGTTCCATACTCATCAGCAAGAATAAGCTACTCTCCATTCACCTACTCCTTCCCTTCCTCCCCTGGCCTTAAATTCATTCGCCTTTACTTTCTATCATCTTTATATCTGATGATGAACCCCCCCAACAAGGCCTATTTCTCTGTAAAAGTTGAGCCTTACACTCTTTTAAGTGATTTTAATCCATCTGTTTTTGCAGAAGAGCTCAAATTGATGTTTTTCACAAAGGATTTCTTAGTCAATGTTACGGAAAAGAAACTCAACATTACATTTACCCCATCTCCTTTAATTTCCAAAGCATTTGCTTTTGTAAATGGCATTGAGATATTCCCGGTGCCCAAAAGTATATACTTCCCGGGTTCCAAGGTTCCTGTTCCTTACCTTGGGCACCAGCAAATTTTATTGACTAACGATGAACATGCTCTAGAGATGTTTTACAGAGTTAGCATTTTTAGTGAACAAACTGGTTCTGAAAATGCTTTTGGAATATGGTTAGATGATTCTAGATACATATCTGGTTCACACTATGGAAGTGTCCTCAATATAAAGTCTCGTGCTGTTAGCTTGAATTACACCACTTTATCTTCAAAGGATTACAATTATACTGCACCAGAAGAGCTATATTGGAGTGCCAGGACAATGGGTGGTGATGGAGATGCTAACATGAAGTACAATTTAACATGGTCTTTCCCAGTTGATTCTGGATTCAAGTACCTTGTTAGGCTTCATTTCTGTGAGATCTCTACGGTGGTAACGCAGCCCAATGAAAGGGTGTTCAAAGTGTACATAAACAACCAAACGGCAGAAGAGAAGATGGACGTAGTTGCTTCAGCCGGAGCCCCATTTACTCCTTTGCACAAGGACTATGTTGTTATGGTTCCTACAGAAAGTGGGAGAATGAAAGATTTGTGGATCTCACTTCACCCTAACTTGGAGTCAAAGCCAAAATTTGCTGATGCCATACTAAGTGGAATTGAGATCATGAAGATAAGTGATAGTAATCATAGTCTTGCAGCAATGTTCCAATTAAGAAGGGAACAAAGAAAGAAGAAAGTTCAACACGTCATTATTGTGGCTGGTGCTACTATAGGTACCATCTTGGGACTGCTCTTAACATTTTTCATTCTTATCCGCAGAGCAGGGACAAAATTGAACTGCAGAACTTCTCATCTACACCCATCAAATTCTAGTAGTGGTCACAAAAACATTCAACCCCCAGTAACTTCAGGTCTTTGCCATCAATTCACACTTGCAGAAATCAGCATAGCCACAAGCAACTTCAGTGAAGATCTTGTCATCGGGGAGGGAGGCTTCGGAAAGGTGTACAGAGGCATCATAAATCATGATGGAGTTACTGCTGTTGCAGTAAAGCGCTCGAATCGTAGTTCTCACCAAGGATATAAAGAGTTTCAAAATGAGATAAAAATTTTCTCATTCTGTCACATGAATTTAGTGTCACTGCTGGGATACTGCCAAGAGGGAAATGAACTGATACTTGTGTATGAATACATGGTTGAGGGTCCTCTATCTGACCACTTATACAAGAAAAAAAAACAGCCATTGGCTTGGATTCAAAGAATAAAGATTTGTGTTGATGCAGCTCGAGGACTACATTACCTCCACACTAGCACAAGGCACCCAGTGATTCACCGTGATGTGAAGTCAGCCAACATATTATTGGATCAGAATTGGGTAGCCAAGATTGCAGATTTTGGGTTGTGTAAAACAGTTCCCTCACATTACCACTCACATGTTAGCACTGAAGTTAAAGGCACTTTTGGATATTTAGACCCTGAGTACTATAAGAGAAGAAAACTGACTCAAAAATCTGATGTGTATTCATTTGGAGTGGTTTTGTTTGAGGTGTTGTGTGGAAGAGCAGCCGTGAATCCTGTGGCAGTGGAAGAGGAAAATGAGAAAGTTGGGTTGGCCACATGGGCCATACACTGTTACAAGAATGGAAGCATTGATGAATTAGTTGATCCTAATTTAGCAGGGAATGTTAGGCCAGAATGCCTGAGGGCGTTTGTGGACATAGGCATCCAGTGCTTGGCTAATAGAAGTGCAGATAGGCCAACTATGGGAGAGGTTCTCAATAGTTTAGAGAGGATCCTTTCCTTGCAGAATAGTTTAGAGGAACAAGAAGTTAACACAACTCAATTTCTACAATAG 2442 0.4038 MKESQMIESSRNGIISCVLLHLFLFLPFIHLITCDPINVPDKILLNCGSNKASPFNGENWIGDVGSNFLPPEYDKSSSPLLISTIHSLVPKVPYSSARISYSPFTYSFPSSPGLKFIRLYFLSSLYLMMNPPNKAYFSVKVEPYTLLSDFNPSVFAEELKLMFFTKDFLVNVTEKKLNITFTPSPLISKAFAFVNGIEIFPVPKSIYFPGSKVPVPYLGHQQILLTNDEHALEMFYRVSIFSEQTGSENAFGIWLDDSRYISGSHYGSVLNIKSRAVSLNYTTLSSKDYNYTAPEELYWSARTMGGDGDANMKYNLTWSFPVDSGFKYLVRLHFCEISTVVTQPNERVFKVYINNQTAEEKMDVVASAGAPFTPLHKDYVVMVPTESGRMKDLWISLHPNLESKPKFADAILSGIEIMKISDSNHSLAAMFQLRREQRKKKVQHVIIVAGATIGTILGLLLTFFILIRRAGTKLNCRTSHLHPSNSSSGHKNIQPPVTSGLCHQFTLAEISIATSNFSEDLVIGEGGFGKVYRGIINHDGVTAVAVKRSNRSSHQGYKEFQNEIKIFSFCHMNLVSLLGYCQEGNELILVYEYMVEGPLSDHLYKKKKQPLAWIQRIKICVDAARGLHYLHTSTRHPVIHRDVKSANILLDQNWVAKIADFGLCKTVPSHYHSHVSTEVKGTFGYLDPEYYKRRKLTQKSDVYSFGVVLFEVLCGRAAVNPVAVEEENEKVGLATWAIHCYKNGSIDELVDPNLAGNVRPECLRAFVDIGIQCLANRSADRPTMGEVLNSLERILSLQNSLEEQEVNTTQFLQ* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01345 813 SUPERFAMILY Protein kinase-like (PK-like) 490 792 IPR011009 -
Lapu2g01345 813 SMART serkin_6 517 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01345 813 PANTHER OS07G0166700 PROTEIN 502 798 IPR045272 GO:0004714|GO:0006468
Lapu2g01345 813 CDD STKc_IRAK 523 794 - -
Lapu2g01345 813 Gene3D - 43 202 - -
Lapu2g01345 813 Gene3D - 231 421 - -
Lapu2g01345 813 ProSitePatterns Protein kinases ATP-binding region signature. 523 547 IPR017441 GO:0005524
Lapu2g01345 813 Pfam Malectin-like domain 46 420 IPR024788 -
Lapu2g01345 813 ProSiteProfiles Protein kinase domain profile. 517 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01345 813 Gene3D Phosphorylase Kinase; domain 1 502 593 - -
Lapu2g01345 813 FunFam FERONIA receptor-like kinase 42 203 - -
Lapu2g01345 813 FunFam FERONIA receptor-like kinase 230 421 - -
Lapu2g01345 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Lapu2g01345 813 FunFam Receptor-like protein kinase FERONIA 594 812 - -
Lapu2g01345 813 Pfam Protein tyrosine and serine/threonine kinase 522 791 IPR001245 GO:0004672|GO:0006468
Lapu2g01345 813 Gene3D Transferase(Phosphotransferase) domain 1 594 812 - -
Lapu2g01345 813 FunFam receptor-like protein kinase FERONIA 480 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01345 Lapu-Chr2 25041992 25044445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01345 31 804 Receptor kinase-like Gene Family AT3G51550 43.735 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu2g01345 Malectin_like 2.6e-28 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01345 - - gmx:100776324 1208.36