Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01344 ATGAAGGTTGTGACATGCTCTGGTTATATTTTTCTCTTGTATCTTTTAAACCTACAACTAGTTGCAGTTGCTGATAATGGCAGTTATGTTCCTACAGAGAACATAGCTCTCAGCTGTGGCTCCAACACAGCAGAATTTGTACAATATGATGGCAGGATTTGGAATGGTGACATTGTTTCACCGTATGTTCCCTCTAATGCTGACACCAAGTCCCTGGTGGTGAGGGCCCCCAACACTCTTCAATCTATTCCTGAAGTTCCCTACATGACTGCAAGGATCTTTAAGTCTCAATTCACCTACACTTTCAATGTAACCCCAGGTCCCAAATTCATTCGCCTTCACTTCTACCCTGCTTCCTACTTGGATCTCAACATCTCCAATGCTTTCTTATCAGTAAGTGCTGCTAACTTCACTCTTCTCCATAACTTCAGTGCTTCCCTCAACGCTGATTACGATAACTACGCCTATTTCATGAAAGAATTCGTTGTGCATGTAAGTGGAAGTGTTTTACAACTCACTTTCTCCCCATCATATAATGCATCTAATGCCTTTGCATTTGTGAATGGAATTGAGGTTGTTTCAATGCCACTTAATTTATACATCAATGGTGATGATGCTCCTCTTCCCTTAGTTGGCCACCATGGCAAAGTTGTGAACATTTATAATGACTCTGCCATGGAAAACTTGTACAGATTGAACGTGGGAGGTGAGCAAATCCCTCCCAAATATGACACAGCCATGTTTCGGACTTGGGACACCGATGATGTTTACATTTTAGGGGCTAATATTGGTATTCTACCCTTTAATATGAGCATGCCGGTTTTGTATTCCGATAATGCTCCACCTTATTCAGCCCCAGCAGATGTCTACCGCACCTCCCGTTCAATGGCACCTTTTGACAAAGGTCTTGTAAATTTAAATTACAATATGACATGGTTTTTTCCCGTTGATTCAGGTTTCCTTTATCTAGTTAGGCTTCACTTCTGTGAAATTGATCAAGTTATAACAAAGATCAACCAGGTAGTTTTTACCGTATTTTTAAATAATCAAACCGCTGATGAACAATTTGATGTAATTGCTTCGGGTGGGGGGCCCGGAGTTGCTGTGCACAGAGACTATGTAGTGATGGTTCCCCATGTTTATGAGGGAAAGCAGGATTTGTGGCTTGATCTGCACCCAAACAAGGATTCTAACCCTATGTACTATAATTCTTTCTTGAATGGTGTGGAGATCTTTAAACTCAACAATTTTGGTGAGAAGAGTCTTGCAGGGCTCAACCCTTCTAAAAGCTTCTTGTCTGGATCAGATGTAAAGGCTCCCCATGTTGCACATTTTAATAAAAGTTCGAAGAAACTCAAATTCATCCTCATTGGATGTGGACTTCTTGCAGTGGTACTACCAATTCTACTTTGCATAGTCTTATTCAGGTTAGAGGTGATTGAGCTTAGAAGGGTCGTGTCATGGTGTGGTCTCACTGTCCACGCACCTAATCGAATTGAAAAGGCAAAAAGGTCGTTACTTTGCTCTCAATTTTCAATGCGAGAGATAAAATTAGCGACAAATGACTTCCATGAGGCTTTACTTATAGGCACTGGTGGATTTGGCAGTGTTTACAAGGGTAGCTTCACTGGTGGCTCAACTTACGTGGCCATTAAACGCGCCAATCCAATGTCAGAGCAAGGTGTTTCAGAATTTGAGACAGAGATCCTTTTGCTCTCACAACTTAGGCATCATAACCTGGTCTCACTTTTGGGTTATTGCAATGAGGATGAGGAGATGATATTGGTCTATGACTTCATGGCCAATGGAAGTCTACATGATCATCTTCATTGTAGGCAGAGAGATCAATCCCCTTTGGATTGGATTCAACGTCTTGAGATATGCATTGGAGTTGCAAGGGGTTTGCACTACCTTCACACAGGCACCAAGCACAAGATCATCCACCGCGACATAAAGACAACCAACATACTCTTAGATCACAACTGGGTGCCCAAAATTTCAGATTTTGGGTTGTCAAAGGCAGGTTACCCTTCCTTAGTCACCACAAACGTGAAGGGTAGCATTGGTTACCTAGATCCCGAGTGCCGTGAAAGCCACAAGTTGTCTGAGAAATCTGATATATACTCATTTGGGGTGGTGTTATTGGAGGTTCTGACTGCAAGGCCAGCTGTAAGTGTAGGTGAAGATGATGAGCATATTAACTTGGCTGAATGGACTATGTCGTGCTTTGAGAGTGGCAATGTGGAGCAAATAGTTGACCCCAACTTGAAACAAAACATAATTAAGGAGTGCTTTGAGTTATATTTAGGAGTTGCAATTAAATGTTTGGCTGAACGAGGGGTGGAGAGGCCATCCATTGGTGAAGTGCTAGAGAGCCTTGTTCTGGCAATGCATCTTCAGAGAAATGAAGGCAGTGACTCAAATGGAAATGAACGCAGAAATGGTAATGCTGTTCTGCAGGGTAATTCAGATTTGACACCTGGGGTTGAGTTCTCTGAAATCATGATGCCTAATGGTCGGTGA 2523 0.4229 MKVVTCSGYIFLLYLLNLQLVAVADNGSYVPTENIALSCGSNTAEFVQYDGRIWNGDIVSPYVPSNADTKSLVVRAPNTLQSIPEVPYMTARIFKSQFTYTFNVTPGPKFIRLHFYPASYLDLNISNAFLSVSAANFTLLHNFSASLNADYDNYAYFMKEFVVHVSGSVLQLTFSPSYNASNAFAFVNGIEVVSMPLNLYINGDDAPLPLVGHHGKVVNIYNDSAMENLYRLNVGGEQIPPKYDTAMFRTWDTDDVYILGANIGILPFNMSMPVLYSDNAPPYSAPADVYRTSRSMAPFDKGLVNLNYNMTWFFPVDSGFLYLVRLHFCEIDQVITKINQVVFTVFLNNQTADEQFDVIASGGGPGVAVHRDYVVMVPHVYEGKQDLWLDLHPNKDSNPMYYNSFLNGVEIFKLNNFGEKSLAGLNPSKSFLSGSDVKAPHVAHFNKSSKKLKFILIGCGLLAVVLPILLCIVLFRLEVIELRRVVSWCGLTVHAPNRIEKAKRSLLCSQFSMREIKLATNDFHEALLIGTGGFGSVYKGSFTGGSTYVAIKRANPMSEQGVSEFETEILLLSQLRHHNLVSLLGYCNEDEEMILVYDFMANGSLHDHLHCRQRDQSPLDWIQRLEICIGVARGLHYLHTGTKHKIIHRDIKTTNILLDHNWVPKISDFGLSKAGYPSLVTTNVKGSIGYLDPECRESHKLSEKSDIYSFGVVLLEVLTARPAVSVGEDDEHINLAEWTMSCFESGNVEQIVDPNLKQNIIKECFELYLGVAIKCLAERGVERPSIGEVLESLVLAMHLQRNEGSDSNGNERRNGNAVLQGNSDLTPGVEFSEIMMPNGR* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01344 840 CDD STKc_IRAK 529 793 - -
Lapu2g01344 840 Pfam Malectin-like domain 37 413 IPR024788 -
Lapu2g01344 840 FunFam FERONIA receptor-like kinase 34 196 - -
Lapu2g01344 840 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 600 800 - -
Lapu2g01344 840 Gene3D - 224 415 - -
Lapu2g01344 840 Gene3D - 34 196 - -
Lapu2g01344 840 SMART serkin_6 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01344 840 SUPERFAMILY Protein kinase-like (PK-like) 504 795 IPR011009 -
Lapu2g01344 840 FunFam receptor-like protein kinase FERONIA 491 599 - -
Lapu2g01344 840 Pfam Protein kinase domain 525 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01344 840 FunFam FERONIA receptor-like kinase 224 415 - -
Lapu2g01344 840 Gene3D Phosphorylase Kinase; domain 1 491 599 - -
Lapu2g01344 840 MobiDBLite consensus disorder prediction 802 840 - -
Lapu2g01344 840 ProSitePatterns Protein kinases ATP-binding region signature. 529 552 IPR017441 GO:0005524
Lapu2g01344 840 ProSiteProfiles Protein kinase domain profile. 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01344 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Lapu2g01344 840 Gene3D Transferase(Phosphotransferase) domain 1 600 817 - -
Lapu2g01344 840 PANTHER OS03G0124300 PROTEIN-RELATED 9 477 IPR046957 GO:0004672
Lapu2g01344 840 MobiDBLite consensus disorder prediction 802 827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01344 Lapu-Chr2 25036289 25038823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01344 20 840 Receptor kinase-like Gene Family AT3G51550 47.263 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu2g01344 Malectin_like 5.7e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01344 - - gmx:100776859 1364.36