Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01322 ATGGATCGGAGCTCTTTCCGGTCGGGAATGCGAAAATCCCATTCTAAACCCGACATATACTCAACCTTCGTAGTTCACGATGACGAAGACGAAGACGAAGACAACGTAGAGACCAATCGCCGGCGGAAATCAGGCGGCGCGCAGCCGCGTGACGATCCTTACGCGACCATGGTGTACAAAGACAACGGCCGCGACGACGATGACAATGACGACGACGAATACTCCTCTCTCCCTCCGCTACTCAAGCGTCTTCCCAAGGACTTCGGCGGCGGAGCGCCGCTGGACGACGATGACGACGATGACGACGCCGGGGACTTCGGCACAGTGATCGTGAAGAGCGACCGTAGACGGCAGCGCGACAGGCCTTCTTCCAGCTTGGCTTCGCCGCCGTGGAAATCTCGGAGCTCGTCTCAGGCGAGTCCTCTGAACAGGTTCGGCGAAGAGGAAGACGACGGCGATGAGGAAGACGATGGCGGCGGATTTTCGACGTTCGTCGTTCGTTCGACGGTGAAGTCTGGCGAAAGAGAGTCGGTAAGCGGAACAGTTGTGCGACGGCCCTCCGGCGGCAGCGGCAGCGTCGGTTCGACGATGGAGAGAGCGGTAGCGAGCATGCAGGGGATGGGAGATTTTGGATTCGGAAAGCAGAGGAAGGGAAGTGGATCTTCGCAGAACGATGAGGGAAGGCATCAATCGATAACGACGAAGGTTTCAACGAGTTCGATTCCTGAAAGTATTACCAGAGAGGACCCTACGATTAAATACGAATTGCTCAATGAACTCGGGAAGGGGTCCTATGGAGCTGTTTACAAAGCAAGAGATTTGAAAACCTCGGAGATGGTTGCTATCAAAGTGATATCGTTATCCGAAGGAGAGGAGGGGTATGAGGAAATCCGTGGTGAGATTGAAATGTTACAACAATGTAATCATCCTAATGTTGTCCGTTATCTTGGAAGCTATCAAGGAGAAGAGTATCTTTGGATAGTGATGGAATACTGTGGTGGTGGTAGTGTTGCTGATTTGATGGGTGTGACTGATGAGCCACTGGAAGAGGGTCAAATAGCATATATCTGTAGAGAAGCATTGAAGGGTCTTGATTATTTGCACTCAATTTTTAAAGTCCATAGAGACATTAAAGGTGGGAATATCTTGTTAACTGAGCAAGGAGATGTCAAGCTAGGTGAGTGCAGGGATTTTGGTGTTGCTTTCATTGGAACTCCTCATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTAGATGTTTGGGCTCTTGGTGTGTCTGCTATTGAAATGGCTGAGGGTGTTCCTCCAAGATCTGATGTACATCCAATGAGGGTTTTATTCATGATATCAATTGAACCAGCTCCGATGCTTGAGGATAAAGAAAAATGGTCTCTATATTTCCATGATTTTGTTGCGAAGTGCCTAACCAAAGAGCCTCGTCTCCGCCCTACTGCATCTGAGATGTTGAAGTTGAAGGAAAATAGAACAAGAGAGATAGACATAGAAGAGACCTTGGGAGATTTATTGGATCCTGCCCAAAACAGGGGTTGGGTTGTCCAACCTCACAAATTCTTTGAAAAGTGGAAAACTGGGTCTGCTGCAATGTTGCCAAAATTGGAGAAGGCAAGGGAAATCAGGGCTTCGATGGCTTTGCAGGCACAAACACTTGCTCCAGCAGCATCAGAGGATCAGTTAGTTTCAAAACCAAATGATGAATATGGAGACACTGTTCCATCCAGACCTCATAACATTGGTGTTGAGGGGCCAGCTGATCTGTCATCGCATGGCACTATGAGGAAGCTACATAAGGTGGAAGATGTAGACATGAGTGAAGGCAACTTTGGCACTGTTATAGTCCATGCAGACGAGTTACATCAGAAGACCACACAATATGCAGATTCTTCAGTTTCCGACTCTGCTGTACCCAGCGGCACAGGAGGCAGATTGGCTAACTCTGGGATTGAGAATCAGAAAGTTGATGTTACTAAAACTGCCTCTTTTAGAGGATCTATTGCTACTACCAATACTCTTCAATCATCTTTACCTTACGCTGGTAATTCAAATGAGCAGAGCCTCAAAATCAAAGGTAGTTATCGAACACCAGCTGGAATGGGTAGTGATATATTCAGGAGTGAAACAGGCAGCCGTAAAGCATTTGCTTTACAAGATAAGCTTTGGTCCATTTATGCTGCTGGTAATACTGTGCCTATCCCATTCTTAAGGGCAACAGATATATCACCCATTGCTCTCTTGTCAGACAATGTACTTGGTGGCCTGCAACAGGATACTGGAGGAACCGGAACAGTGGAAGCATTGCAAGAGCTTTTCAGTGGTGATGGACAGTCAAAGAAAGGCCGCAGAGGACTAAATGAGCAGATGCCTCTTCCTCCAAGCATTTACCAAAGGTTGACATCAAGTTCGACACTTATGAATTTGGCACAGGCTTTAGCTTACCATAAGATGTGTTACGAGGATATGCCACTGCAAGAGCTGCAAGCGACCCAGGAGCAGCGGACTATTCAAAATCTCTCTGACACACTTCGAACCATTCTTCGGTTGTAG 2577 0.4765 MDRSSFRSGMRKSHSKPDIYSTFVVHDDEDEDEDNVETNRRRKSGGAQPRDDPYATMVYKDNGRDDDDNDDDEYSSLPPLLKRLPKDFGGGAPLDDDDDDDDAGDFGTVIVKSDRRRQRDRPSSSLASPPWKSRSSSQASPLNRFGEEEDDGDEEDDGGGFSTFVVRSTVKSGERESVSGTVVRRPSGGSGSVGSTMERAVASMQGMGDFGFGKQRKGSGSSQNDEGRHQSITTKVSTSSIPESITREDPTIKYELLNELGKGSYGAVYKARDLKTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMGVTDEPLEEGQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGECRDFGVAFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGVPPRSDVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTASEMLKLKENRTREIDIEETLGDLLDPAQNRGWVVQPHKFFEKWKTGSAAMLPKLEKAREIRASMALQAQTLAPAASEDQLVSKPNDEYGDTVPSRPHNIGVEGPADLSSHGTMRKLHKVEDVDMSEGNFGTVIVHADELHQKTTQYADSSVSDSAVPSGTGGRLANSGIENQKVDVTKTASFRGSIATTNTLQSSLPYAGNSNEQSLKIKGSYRTPAGMGSDIFRSETGSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGLQQDTGGTGTVEALQELFSGDGQSKKGRRGLNEQMPLPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01322 858 FunFam Aurora kinase A 246 335 - -
Lapu2g01322 858 Gene3D Transferase(Phosphotransferase) domain 1 251 518 - -
Lapu2g01322 858 MobiDBLite consensus disorder prediction 579 600 - -
Lapu2g01322 858 SUPERFAMILY Protein kinase-like (PK-like) 253 499 IPR011009 -
Lapu2g01322 858 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 236 502 - -
Lapu2g01322 858 MobiDBLite consensus disorder prediction 207 244 - -
Lapu2g01322 858 MobiDBLite consensus disorder prediction 123 143 - -
Lapu2g01322 858 ProSitePatterns Protein kinases ATP-binding region signature. 260 283 IPR017441 GO:0005524
Lapu2g01322 858 ProSiteProfiles Protein kinase domain profile. 254 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01322 858 MobiDBLite consensus disorder prediction 105 122 - -
Lapu2g01322 858 MobiDBLite consensus disorder prediction 1 195 - -
Lapu2g01322 858 MobiDBLite consensus disorder prediction 216 244 - -
Lapu2g01322 858 Pfam Protein kinase domain 254 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01322 858 SMART serkin_6 254 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01322 858 FunFam serine/threonine-protein kinase dst1 isoform X1 251 511 - -
Lapu2g01322 858 MobiDBLite consensus disorder prediction 637 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01322 Lapu-Chr2 24227670 24248430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01322 1 858 MAP Kinase Kinase Kinase Kinase AT1G69220 56.022 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Lapu2g01322 Pkinase 1e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01322 - - gmx:100804995 1284.63