Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01311 ATGAGAAAGAGAGTTGTGTCCTTTGTTCTTCCCCAAAGAGGCTTCTTCTTCTCCTCCACTCCTGAAACCCCCACCCTTTACTCCTTCCTCCAGCCCTCAATCTTTGCCCTCACCAAAAACAAGCAGCAACCCATTTCAGAAGCCTCCCCAAAGTCCCCAACTTTGGTCTCCTCTTCCCAGCTCTCCACTCTCCAAACCACCCTCCAAAAGTCCCTCCTAAGCAGCAACACTGATGAGGCATGGAAGTCCTTCAAGGCCCTCACCACCCACCAAGCCTTCCCTCCCAAACCCCTCACCAACTCCCTCCTCTCCCACCTCTCCTCCCTTGGTGATACCCTCAACCTCAAGAGGGCCTTTGCCTCTGCTCTCTTCCTCATGGAGAAGAACCCCTTGCTGCTCCAACATGACACCCTCCACCACTTGCTCCTCTCCATGAAGGGTGCCAACACTGCGGCCCCTGCCTTTGCCCTTGTCAGGTCCATGCTCAGGTTCAGGTTCTTTGTTCCCTTTCATGTTTGGGGGCCTGTGCTTGTTGAGATCAGTAGGAACTGTGGTAATCTTGCTGCTTTCCTGAGACTCTTTGAGGAGAATTGTAGGGTAGCTCTTGAGGAGAGAATTGAGTCCATGAAGCCTGATGTTGGTGCTTGCAATGCTGCCCTGGAAGGTTGCTGCTGTGAGCTTGAGTCTGTTAGTGATGCTGAGAGAATTGTGGGGACAATGTCAAGTTTAGGGGTTAGGCCTGATGAGTTCAGTTTTGGGTTTCTGGGGTATTTGTATGCACTCAAGGGGTTGGAAGAGAAGATTAGGGAGCTAGAAGTTTTGATGGGTAGGTTCGGCTGTTCGAACAAGAAGGGTTTTTATTGTAATTTGATTAAGGGTTATGTTAAGTCAGGGAATCTGGCTTCTGTGGAGGCAACTATTGTTAGATTTCTGAATGATGGAGGTGGGAAGGATTGGGGTTTTGGTATTGAAACTTTCTGTGAAGTGATTAAGGTTTATTTTCAGAAGGGAAATATAAAGGGGTTGGCTAATTTGATTGTTGAAGCTCAGAAGATAGAGGGTTCAAATATTGTGGTTGATAGGTGTATAGGCTATGGTATTGTTAATGCGTGTGTTAGTATTGGACTATCTGATAAAGCACATAGTATTCTTGATGAGATGAATGTTCAGGGGGCCTCTGTGGGTCTTGGGGTCTATGTACCTATCTTGAAGGCTTACTGTAAAGAAAATAGAACTGCTGAGGCTACTCAATTGGTGATGGAGATTAGTAATTCAGGTCTTCAGTTGGATATGGGAACCTATGATGCTTTGATAGAAGCATCCATGTGCAGCCAAGATTTTCAGTCAGCGTTTTCACTGTTTAGGGACATGAGAGAGGCAAGGATTCCTGACTTGAAAGGGAGTTACTTAACTATAATGACAGGTTTGATGGAGAAACATCGGCCTGAGTTGATGGCAGCTTTCTTGGATGAGGTGGTTGAGGATCCCAGGATTGATGTAGGTACTCATGATTGGAATTCTATCATCCATGCTTTCTGTAAAGCTGGGAGACTTGAAGATGCGAGAAGAACTTTCAGAAGGATGATGTTCCTGCAGTTTGAGCCAAATGATCAGACATACTTGTCTATGATTAATGGATATGTCTTGGCTGAGAAATACTTTCTCGTGCTGATGTTGTGGAACGAGGTTAAGAGGAAGCTATCCATGGATGGGCAGAAGGGGATCAAGTTTGACCACAATTTGGTTGATGCGTTCCTGTATGCTATGGTCAAGGGAGGTTTCTTTGACGCTGTTATGCAAGTTGTGGAGAAAGCTAATGAGATGAAAATATTTGTTGATAAGTGGAGATACAAGCAAGCATTCATGGAGACCCATAAAAAGCTCAGGGTGGCAAAGTTAAGGAAAAGAAATTTTAGAAAAATGGAAGCACTTATTGCTTTCAAGAACTGGGCTGGCTTAAATGCATGA 1968 0.4527 MRKRVVSFVLPQRGFFFSSTPETPTLYSFLQPSIFALTKNKQQPISEASPKSPTLVSSSQLSTLQTTLQKSLLSSNTDEAWKSFKALTTHQAFPPKPLTNSLLSHLSSLGDTLNLKRAFASALFLMEKNPLLLQHDTLHHLLLSMKGANTAAPAFALVRSMLRFRFFVPFHVWGPVLVEISRNCGNLAAFLRLFEENCRVALEERIESMKPDVGACNAALEGCCCELESVSDAERIVGTMSSLGVRPDEFSFGFLGYLYALKGLEEKIRELEVLMGRFGCSNKKGFYCNLIKGYVKSGNLASVEATIVRFLNDGGGKDWGFGIETFCEVIKVYFQKGNIKGLANLIVEAQKIEGSNIVVDRCIGYGIVNACVSIGLSDKAHSILDEMNVQGASVGLGVYVPILKAYCKENRTAEATQLVMEISNSGLQLDMGTYDALIEASMCSQDFQSAFSLFRDMREARIPDLKGSYLTIMTGLMEKHRPELMAAFLDEVVEDPRIDVGTHDWNSIIHAFCKAGRLEDARRTFRRMMFLQFEPNDQTYLSMINGYVLAEKYFLVLMLWNEVKRKLSMDGQKGIKFDHNLVDAFLYAMVKGGFFDAVMQVVEKANEMKIFVDKWRYKQAFMETHKKLRVAKLRKRNFRKMEALIAFKNWAGLNA* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01311 655 Pfam PPR repeat family 505 547 IPR002885 -
Lapu2g01311 655 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 212 247 IPR002885 -
Lapu2g01311 655 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 501 535 IPR002885 -
Lapu2g01311 655 PANTHER BNAC05G43320D PROTEIN 18 654 - -
Lapu2g01311 655 Pfam PPR repeat 368 388 IPR002885 -
Lapu2g01311 655 Gene3D Tetratricopeptide repeat domain 463 627 IPR011990 GO:0005515
Lapu2g01311 655 NCBIfam pentatricopeptide repeat 505 536 IPR002885 -
Lapu2g01311 655 Gene3D Tetratricopeptide repeat domain 59 359 IPR011990 GO:0005515
Lapu2g01311 655 Gene3D Tetratricopeptide repeat domain 392 462 IPR011990 GO:0005515
Lapu2g01311 655 Pfam Pentatricopeptide repeat domain 418 462 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01311 Lapu-Chr2 23964980 23973569 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01311 208 607 Glycosyltransferase AT1G05670 19.506 7.22e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01311 - - gmx:100811600 1097.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01311 2 23964980 23973569 Lapu2g01311 2 23964980 23973569 ECH