Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01307 ATGTTTTTCTCTGTGTCCATTGGTTCTTCTGCGGCATTGCCTTTGCCACTTAGATGCAACGCCGAAATCTCTTCTCCCCGGGTAGCTGCTGATGCCTTCCCTTCCTTTCTCCCCAGAGAAGTGCACACCATTCAAGACCCTTTTGCCAGAAAATTCGCCATGCGGATTCAGAGGCTACCCGTGCCTGTTAGGTTCTCAGAAAATCCCATCATGAGTAGTTGTGTGAAGCCAATGGTGCAGAGCAAGGAAACTCCAGTTGTTCTTCTACATGGTTTTGACAGCTCTTGTTTAGAATGGAGATATGTATTACCATTGCTTGAGGAATCTGGTATTGAGACCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAAACTTCCTCCCTGTGATGTGGTATCAAAGCGTGATCATTTCTACCAGTTTTGGAAGTGCTACATCAGGAGGCCAATGACATTAGTTGGACCAAGCCTTGGCTCTGCTGTTGCCATTGACTTTGCAGTCAATTATCCCGAAGCTGTGGAGAAGCTTGTTCTGATTGGTGCTAGTGTATATGCAGAGGGAACTGGAAAGCTGGCAACCTTACCCAGAGCAGTAGCCTATGCTGGGGTTAATTTATTGAAGAGTGTTCCATTACGCTTATATGCCACCTATTTGACCTTCACAAACATTTCCTTCAGCACTGGCCTTGATTGGACTAATGTGGGCCGATTGCATTGTTTATTGCCTTGGTGGGATGATGCTACTGTGGATTTCATGACAAGTGGTGGTTATAATGTTGCTCCTTTAATAGGAAAGGTAAAACAGAAAACACTGATAATATGGGGTGAAAATGACCGCATCATCAGCAATAAGTTTGCGGTGCAACTCCACTGTGAATTACCTGATGCAACTATACGCCAAATACCCCATTGTGGCCATCTTCCTCATCTAGAAAGACCAGATTCTACCATCAAATTAATTGTTGAATTTGTGCAAAGAGAGGCTAAGCAATTGAGTCCATATGTTACACAACTTTGA 1026 0.4405 MFFSVSIGSSAALPLPLRCNAEISSPRVAADAFPSFLPREVHTIQDPFARKFAMRIQRLPVPVRFSENPIMSSCVKPMVQSKETPVVLLHGFDSSCLEWRYVLPLLEESGIETWAIDILGWGFSDLEKLPPCDVVSKRDHFYQFWKCYIRRPMTLVGPSLGSAVAIDFAVNYPEAVEKLVLIGASVYAEGTGKLATLPRAVAYAGVNLLKSVPLRLYATYLTFTNISFSTGLDWTNVGRLHCLLPWWDDATVDFMTSGGYNVAPLIGKVKQKTLIIWGENDRIISNKFAVQLHCELPDATIRQIPHCGHLPHLERPDSTIKLIVEFVQREAKQLSPYVTQL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01307 341 SUPERFAMILY alpha/beta-Hydrolases 84 329 IPR029058 -
Lapu2g01307 341 Gene3D alpha/beta hydrolase 76 334 IPR029058 -
Lapu2g01307 341 PRINTS Alpha/beta hydrolase fold signature 110 125 IPR000073 -
Lapu2g01307 341 PRINTS Alpha/beta hydrolase fold signature 155 168 IPR000073 -
Lapu2g01307 341 PRINTS Alpha/beta hydrolase fold signature 273 287 IPR000073 -
Lapu2g01307 341 PRINTS Alpha/beta hydrolase fold signature 169 182 IPR000073 -
Lapu2g01307 341 PRINTS Epoxide hydrolase signature 90 108 IPR000639 GO:0003824
Lapu2g01307 341 PRINTS Epoxide hydrolase signature 110 125 IPR000639 GO:0003824
Lapu2g01307 341 PRINTS Epoxide hydrolase signature 169 182 IPR000639 GO:0003824
Lapu2g01307 341 PRINTS Epoxide hydrolase signature 304 326 IPR000639 GO:0003824
Lapu2g01307 341 PANTHER HYDROLASE 15 330 - -
Lapu2g01307 341 Pfam Alpha/beta hydrolase family 86 319 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01307 Lapu-Chr2 23863482 23869831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01307 85 327 Acyl Lipid Metabolism Gene Families AT3G10840 23.885 7.97e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01307 - - gmx:100792060 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01307 2 23863482 23869831 Lapu2g01307 2 23863482 23869831 ECH