Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01256 ATGGACAATAGTATTCTGGGTCTTCTCAAGCTGCGAATTAAAAGAGGCACTAATCTTGCAATTCGTGATGCCATCAAAGGACGTGCCAGTGACCCTTATGTCGTCGTCAACATGGGCGATCAGAAGGTGAAGACTTGTACTATAAAAAACAACTGCAATCCTGAGTGGAATGAAGAAAGGACCCTTTCTGTAAAGGACGTTAAAACCCCAATACATCTATCAGTGTATGACAAAGACACATTCTCAGGAGATGATAAAATGGGAGATGCAGATATTGACCTGAAACCATATGTTCAGTGTGTGCAAATGGGGTTGAGTAATCTCCCAAATGGTTCTGTACTCACCACCATTCAACCAGATGAAACTAATTGCCTTGCTAAAGAAAGCACCTGCATTTGGCAAAATGAAAATATCATCCAAGAAATGATTTTGAGATTGAAAAATGTTGAGAGTGGGGAAGTGGTTGTGGAAATTGAGTGGGTTGATGTTATTGGTTGCAAGGGCTTATCACATGTACAACTTTAA 525 0.4019 MDNSILGLLKLRIKRGTNLAIRDAIKGRASDPYVVVNMGDQKVKTCTIKNNCNPEWNEERTLSVKDVKTPIHLSVYDKDTFSGDDKMGDADIDLKPYVQCVQMGLSNLPNGSVLTTIQPDETNCLAKESTCIWQNENIIQEMILRLKNVESGEVVVEIEWVDVIGCKGLSHVQL* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01256 174 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Lapu2g01256 174 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 95 IPR035892 -
Lapu2g01256 174 Gene3D C2 domain 5 166 IPR035892 -
Lapu2g01256 174 Pfam C2 domain 8 96 IPR000008 -
Lapu2g01256 174 SMART C2_3c 8 106 IPR000008 -
Lapu2g01256 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 5 167 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01256 Lapu-Chr2 22741154 22742081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01256 42 171 C2H2 Transcription Factor Family AT1G70790 59.848 6.82e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01256 - - gmx:100784381 291.967