Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01251 ATGGAGCAAGGGAAATCAGAGACTCGTGTGCATGCAAATCCAAATCCCGGTAACGAAGAAACACAGTGTTTGGATTCTGGCAGTGTTCAGGGATTGAAAAAGAAGCGCGGCAGAAAAAGTAAAAGGGACAAGGAGGAGATGGAAAAGAAGAAAACGTTAGATGCTAGTGCCGAGGAGGGTGGGGTTTCCGAGCAGAGACCAAGTAGAAAAAGGAAGAACGATGGTGGAAATGGTGAGCTTGAAATGTCTGGCGCTGAGAAACCGTATGGTCTTAGGGGTCGTAAACAAGAGATGATGCAAAAAGTCGTCAAGAAAAGGGCTAAGTGTGGTGAAGAGGAGCCCTCAACAACATGCCACCAATGTAAGAGAAACGATAAAGGTCGTGTTGTGAGTTGCTTGGCCTGTGACAAGAGAAGATTTTGCCTATTCTGTTTACGAGCTTGGTATCCTCATTTGAAAGAGGAGGATATTGCTAAGGCATGTCCTGTGTGCCGTGGTAATTGCAATTGCAAAGCATGCCTGAGCTCTGTTGGACTTATTAATCAAATGAAGAAAAAAGCAACGGATGATAAGGACGAGAAGGTTGAGCTCTCTTTGTATTTGCTGCAAGTACTTCTTCCGTTTTTAAGGCAGCTGGATGAAGAACAGATGATTGAGAATGAGGCAGAAGCTAAGATACAAGGGCTCACAGTCTCCGAGCTAAATATAGTTAAGGCAGATTTCTCTTTAGAAGAGCGTGTGTACTGTGACAACTGCAAAACGTCAATATTTGATTACCACAGAAGCTGCACAAAATGCTCTTTTGACCTTTGTCTCATCTGTTGCCGTGAGCTTCGTAGTGGGCAGCTTGTAGGTGGTGCAGATCCAATTGAGTTGGAGTTTGTTTGGCAAGGTCGTGGTTACTTGCATGCTGAAAAAGCAATTGAAAAGGTAAAACAAACTGCATCAAATGCTGATGCTAAGCCTCCTGAGGTTCACGAATGGTCAAGATGTGGGTGGCATTCACATAGTAATGGTAGCATTCCTTGTCCAAAAGTCAATGATCAATGCAACCATGGTTTTCTTGAACTGAGAAGCATATTGGGTCAACATTTTATCTCTGAGTTAGTTTGTAAAGGGAAAGAACTAGTACAAGCATACAAGATCCAGAATGTATTTAAGACCCCTGACAGATTCTGTTCATGTTTGGGGCTTGATAGAAACACAGATGTTAGATATAATAATATGAGGAAGGCTGCTTCTCGTGATAATTTGGCTGACAACTATTTATACTGTCCTAAGGCTGTTGATCTACAGGACAAGGATTTAAAGCATTTTCAGTGGCATTGGGAAAAGGGGGAGCCTGTCATTGTCAGCAATGTGCTTGAATGCACTTCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTACGTCATGTAACTACTGCTACCAAGCGTGGTCAACATTTGGATGTGGAAACAATTGATTGCTTAGATTGGTGTGAGGGGGGAATTAATATCCACCAATTCTTTACTGGGTATACAGAAGGTCGTATGGATTGGCTTGGTTGGCCTCAGATATTGAAATTAAAAGATTGGCCTCCTTCTAATTTATTTGAGGAACAGTTGCCTCGTCATTGTGCTGAGTTCATATCGTCCTTACCCTTCAAGGAATATACTGATCCTATCAGAGGTGCTCTTAACCTTGCTGTGAAGTTGCCTGACAAATCTATAAAGCCAGACATGGGGCCAAAGTCTTATATTGCTTATGGATTTCCTTCGGAGCTTGGGCGTGGTGATTCAGTGACTAAGATCCACTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTGAAATTGAATTCTGAGCAACTAACTGCCATTGAGAAGTTGAAACAAAAGCATTTTGAGCAAGACAAAAGGGAGTTATTTGGTGATGATCATGATGGAGAAACCAATGCTGACATGCTTAATAATTCCTCTTCTACCATAAATACTTTGGACGACCAGAATAGTGTTCAAGTTATGGAACATGAAGGTAGATTATGTGATGGGAAAGAAGTCAACCAATTTAATCAATCTGGTTATAATGAGATTGCAGCTGCTAAGGAGGATGGTCTTTTATGTGAATCAAAAGTAAAAGAGGTTGAGAAAGTAGAAACAAAACCAGAAAATGATTTGTTGTTTGGGGCCGATGCTTCAGAAGGTGCTCTCTGGGATATTTTTCGAAGGCAAGATGTATCTAAATTGCAAGAATATTTGAAGATGCATTTCCGGGAGTTTAGGCATGTCCATTGTTGTCCTTTAAAGCAGGTTATTCACCCCATTCATGACCAGACTTTCTATCTGACCATGGAGCATAAGAGGAAGCTTAAGGAGGAGTATGGAATTGAGCCCTGGACTTTTGTTCAAAAGTTAGGAGATGCTGTTTTTATTCCTGCTGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGTATCAAGGTTGCGATGGATTTTGTTTCCCCTGAAAATGTTGGTGAGTGCTTTCGTTTGACAGAGGAATTTCGCACACTTCCAATAAATCACAAGTCCACAGAGGACAAATTGGAGGTAAAGAAAATGACAGTATTTGCTATTCAAGATGTGGTTGGAAAGTTGGAGAAATCAAGGACTGGGTTAACCAAGGTTCCAGAGTAA 2676 0.4152 MEQGKSETRVHANPNPGNEETQCLDSGSVQGLKKKRGRKSKRDKEEMEKKKTLDASAEEGGVSEQRPSRKRKNDGGNGELEMSGAEKPYGLRGRKQEMMQKVVKKRAKCGEEEPSTTCHQCKRNDKGRVVSCLACDKRRFCLFCLRAWYPHLKEEDIAKACPVCRGNCNCKACLSSVGLINQMKKKATDDKDEKVELSLYLLQVLLPFLRQLDEEQMIENEAEAKIQGLTVSELNIVKADFSLEERVYCDNCKTSIFDYHRSCTKCSFDLCLICCRELRSGQLVGGADPIELEFVWQGRGYLHAEKAIEKVKQTASNADAKPPEVHEWSRCGWHSHSNGSIPCPKVNDQCNHGFLELRSILGQHFISELVCKGKELVQAYKIQNVFKTPDRFCSCLGLDRNTDVRYNNMRKAASRDNLADNYLYCPKAVDLQDKDLKHFQWHWEKGEPVIVSNVLECTSGLSWEPLVMWRALRHVTTATKRGQHLDVETIDCLDWCEGGINIHQFFTGYTEGRMDWLGWPQILKLKDWPPSNLFEEQLPRHCAEFISSLPFKEYTDPIRGALNLAVKLPDKSIKPDMGPKSYIAYGFPSELGRGDSVTKIHCDMSDAVNVLTHIAEVKLNSEQLTAIEKLKQKHFEQDKRELFGDDHDGETNADMLNNSSSTINTLDDQNSVQVMEHEGRLCDGKEVNQFNQSGYNEIAAAKEDGLLCESKVKEVEKVETKPENDLLFGADASEGALWDIFRRQDVSKLQEYLKMHFREFRHVHCCPLKQVIHPIHDQTFYLTMEHKRKLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCIKVAMDFVSPENVGECFRLTEEFRTLPINHKSTEDKLEVKKMTVFAIQDVVGKLEKSRTGLTKVPE* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01251 891 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 113 179 IPR018866 -
Lapu2g01251 891 SUPERFAMILY Clavaminate synthase-like 435 865 - -
Lapu2g01251 891 Gene3D Cupin 418 858 - -
Lapu2g01251 891 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 18 883 IPR045109 GO:0032454|GO:0033169
Lapu2g01251 891 MobiDBLite consensus disorder prediction 41 77 - -
Lapu2g01251 891 SMART cupin_9 538 849 IPR003347 -
Lapu2g01251 891 MobiDBLite consensus disorder prediction 8 28 - -
Lapu2g01251 891 ProSiteProfiles JmjC domain profile. 557 849 IPR003347 -
Lapu2g01251 891 MobiDBLite consensus disorder prediction 1 92 - -
Lapu2g01251 891 Pfam JmjC domain, hydroxylase 738 832 IPR003347 -
Lapu2g01251 891 ProSiteProfiles Zinc finger RING-type profile. 118 165 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01251 Lapu-Chr2 22679756 22693450 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lapu2g01251 JmjC 9.2e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01251 K15601 - gmx:100797799 1394.02