Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01228 ATGAAGAAGTTTAAGAAGATACATTACTTTCCATCTCTGCTCACAGTAATACTAAACCAACCGCAGCAGTTTCATCAGTGGCTGCTCCAAAAGGCAATGGCATCAGCGTCACCGCCTTCTCCTTTCCTCCTCCTTCTCACCACCGCTATCTCCCTCTTCTTTCCCCTCTCCGTCGCCGTTCACTCCACCAACCCCGACTTCCACCCTCTAATGTCGTTCAAAGCCGCTTCCGACCCTTCCAACAGACTCGCCCACTGGAACTCCACAGCCTCAAACCCCTGCACCTGGTACGGTGTCTCTTGTCTCCGTAACCGTGTCTCCCGCCTAATCCTTGAAGACCTAAACCTTACCGGCTCCATCCACCCCCTAACCTCCCTCACCCAACTTCGCATCCTCAGCCTGAAACGCAACCGTTTCAACGGCCCCATCACCTCTCTCGCCAACCTCACCGCCCTCCGCCTTCTCTTCCTCTCCCACAACAATTTCTCCGGCCACTTCCCTGCCGCGCTCACCTCTCTCTACCGCCTTGATCTCTCACACAACAGTCTCTCTGGCGAAATTCCCGCCACGCTCAACCGCTGGCCCCACCTCCTCACCCTCCGCATCGACTACAACCGCCTCCGCGGCCGCATTCCCAGCAACATCAACCTCTCTCATCTCCAAGATTTTAACGTCTCAAACAACCTGTTAACTGGTCAAATACCGGAATCGCTCTCGGTTTTCCCCGGATCCGCGTTTTCTCACAACCCCTCACTCTGTGGAGCTCCCTTGCGTGAATGCAAAGGCAAAGCAATCATCCCAGCCCTCGCTTCCCCGTTGAAGCCGAGAAACGACACCGTTTTTGGCAAACCCGGCGGCCGGGAGAAAATAATGAGGGTGATGGTCTTGATCGGTATTGTGGTGGGCGACGTGCTGGTGCTGGCTTTGGTGTCGCTGCTTCTCTACTGCTATTTCTGGAGGAACTACTCTGCTGCTGCAAAGTTGAGAAATGAGGGAAAAGAGAAGACGAGTTGGAAGATGGTGGATGAGTATAAGGGTAGTGGTGGTGGTGGTGGAATGGTGTTTTTGGACGGGGTGAGGAGGTTTGAGTTGGAGGAGTTGCTGCGTGCGTCGGCGGAGCTGTTGGGGAAGGGTGCGTTTGGGAGTGCGTATAAAGCCGTGCTTGACGACGGAACTGTGGTGGCGGTGAAGAGGCTGAAGGAGGTTAGTGTCGGAGGGAAGAGGGAGTTCCAGCAACGAATGGAAGTGGTTGGAAGGTTGCGACACTCGAATGTTGTTAGTTTGAGGGCTTACTATTTCACCAAAGATGACAAGTTCCTCGTTTCTGACTACATGTGCAACGCCAGCTTCTCATTCCTTCTCCACGGTAATCGAGGACCAGGACGGACCCCACTGGATTGGACAACGAGGTTGAAGATCGCAGCTGGAGCGGCACGAGGCGTAGCATTCATTCACAATCATAACCTCACCCACGGTAACATCAAATCCACCAATGTTCTTATTGACGTGGCAGGCAACGCGCGCGTCGCGGATTTTGGTCTCTCCATCTTCGCCACCGCCTCCACTTTAAGATCCAACGCCTACCGCGCGCCAGAGGTATCGGACGGTCGCAAGCAGACCCAGATGTCTGACGTGTACTCCTTTGGCGTTCTATTGATAGAGATGCTGACGGGTAAGTGTCCCTCCGCCGCAGACTGCGGAGACCAGGCGGCGTTGAACCTTCCTCGGTGGGTCCGATCGGTGGTGAGAGAGGAGTGGACGGCGGAGGTGTTCGATCTAGAACTGTTGAGCTATAAGGACATTGAGGAGGAGATGGTGGCGCTGCTGCAGATAGCTATTGCGTGCACTGCGACGGAACCTGATGAACGGCCTAGGATGAGCCACGTGGTGAAGATGATCGAGGAATTGCGTGGGGTCCAGATTTCGCCGTGTGATGACGCGTTGGACTCGCTTTCTGAGTCACTCTCCTTGCCTGAAGATGGTGGCGGTGGTGCAAGGGCTAGTCAATGA 2010 0.5483 MKKFKKIHYFPSLLTVILNQPQQFHQWLLQKAMASASPPSPFLLLLTTAISLFFPLSVAVHSTNPDFHPLMSFKAASDPSNRLAHWNSTASNPCTWYGVSCLRNRVSRLILEDLNLTGSIHPLTSLTQLRILSLKRNRFNGPITSLANLTALRLLFLSHNNFSGHFPAALTSLYRLDLSHNSLSGEIPATLNRWPHLLTLRIDYNRLRGRIPSNINLSHLQDFNVSNNLLTGQIPESLSVFPGSAFSHNPSLCGAPLRECKGKAIIPALASPLKPRNDTVFGKPGGREKIMRVMVLIGIVVGDVLVLALVSLLLYCYFWRNYSAAAKLRNEGKEKTSWKMVDEYKGSGGGGGMVFLDGVRRFELEELLRASAELLGKGAFGSAYKAVLDDGTVVAVKRLKEVSVGGKREFQQRMEVVGRLRHSNVVSLRAYYFTKDDKFLVSDYMCNASFSFLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHNHNLTHGNIKSTNVLIDVAGNARVADFGLSIFATASTLRSNAYRAPEVSDGRKQTQMSDVYSFGVLLIEMLTGKCPSAADCGDQAALNLPRWVRSVVREEWTAEVFDLELLSYKDIEEEMVALLQIAIACTATEPDERPRMSHVVKMIEELRGVQISPCDDALDSLSESLSLPEDGGGGARASQ* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01228 669 Pfam Protein kinase domain 372 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01228 669 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524
Lapu2g01228 669 SUPERFAMILY Protein kinase-like (PK-like) 373 633 IPR011009 -
Lapu2g01228 669 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 49 637 IPR046959 -
Lapu2g01228 669 SUPERFAMILY L domain-like 72 258 - -
Lapu2g01228 669 ProSiteProfiles Protein kinase domain profile. 369 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01228 669 FunFam pollen receptor-like kinase 1 343 444 - -
Lapu2g01228 669 Pfam Leucine rich repeat N-terminal domain 64 101 IPR013210 -
Lapu2g01228 669 Gene3D Phosphorylase Kinase; domain 1 352 444 - -
Lapu2g01228 669 Gene3D Ribonuclease Inhibitor 69 171 IPR032675 -
Lapu2g01228 669 Gene3D Ribonuclease Inhibitor 172 260 IPR032675 -
Lapu2g01228 669 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 445 643 - -
Lapu2g01228 669 Gene3D Transferase(Phosphotransferase) domain 1 445 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01228 Lapu-Chr2 22307105 22311840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01228 66 667 Receptor kinase-like Gene Family AT1G68400 58.723 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu2g01228 Pkinase 1.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01228 - - vun:114168386 1000.73