Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01223 ATGGTTCCTACTGAGATCAGAGGAGTCCACTATCTAGCATCTGAAAATCCATTCCTAGTTCCACCCAACTTTGGCCTTCTGCAAAGTGACATCCCAAACCTTCATCTGAACACCCTCCTAAGCAACTTTCCAAACTGTCACTTCCCTCCTTCAGGCCTTGAATTTGTTGCTCCTCCCTCCTCATGCCTCAGCAGCAACTCAACCTCTGATGAAGCTGATGAAATCCAGTTTAACATCATCGACGAAAGGAAGCATAGGAGAATGATATCCAACCGAGAATCTGCACGCAGATCAAGGATGAGGAAGCAAAAGCACTTGGACGAACTGTGGTCACAGGTTGTCAGGCTCAGAACTGAGAACCACAACCTTATTGACAAACTCAACCATGTGTCAGAGTCTCATGACAGAGTCCTCCAAGAGAATGCTCGCCTCAAGGAAGAAGCTTCTGATCTTCGCCAAATGCTAGCAGACATGCAAATTGGAACCTCCTTTGCTTGCACCATGGAAGATCTAGAGGACCTTCCATGCAACAAACCTGATCCCTTAAACCAATCAAACACTCCGGCAGACATGCTTCATGAATGA 585 0.465 MVPTEIRGVHYLASENPFLVPPNFGLLQSDIPNLHLNTLLSNFPNCHFPPSGLEFVAPPSSCLSSNSTSDEADEIQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHVSESHDRVLQENARLKEEASDLRQMLADMQIGTSFACTMEDLEDLPCNKPDPLNQSNTPADMLHE* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01223 194 CDD bZIP_plant_GBF1 84 135 IPR045314 GO:0003700|GO:0006355
Lapu2g01223 194 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
Lapu2g01223 194 SUPERFAMILY Leucine zipper domain 83 133 IPR046347 GO:0003700|GO:0006355
Lapu2g01223 194 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Lapu2g01223 194 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Lapu2g01223 194 Gene3D - 81 136 - -
Lapu2g01223 194 Coils Coil 127 161 - -
Lapu2g01223 194 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 166 IPR044521 -
Lapu2g01223 194 FunFam BZIP transcription factor 81 132 - -
Lapu2g01223 194 Pfam bZIP transcription factor 83 141 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01223 Lapu-Chr2 22178059 22178902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01223 28 171 bZIP Transcription Factor Family AT3G30530 56.024 2.16e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu2g01223 bZIP_1 6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01223 - - gmx:778126 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01223 2 22178059 22178902 Lapu1g01201 1 24958646 24959512 PCT