Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01218 ATGCGAATAAAACCTACTACTTCCGGTCCTGAAGTTTCTTCGCTTGAAAAAAAAAATCTGGGACATATTGCCCAAATAATAGGTCCGGTACTAGATGTAGCCTTTCCCCCGGGAAAGATGCCTAATATTTACAACGCTCTAGTAGTTAAGGGTCGAGATACTGTGGGTCAACAAATTAATGTGACTTGCGAAGTACAGCAATTATTAGGAAATAATCGAGTTAGAGCTGTAGCTATGAGTGCTACAGATGGTCTAAAGAGAGGAATGGAAGTTATTGACACAGGAACTCCCCTAAGTGTTCCAGTAGGCGGAGCAACTTTAGGACGAATTTTCAACGTGCTTGGAGAGCCGATTGATAATTTAGGTCCTGTAGATACTCGTACAACATCTCCCATTCATAGATCTGCACCTACCTTTATACAATTAGATACAAAATTATCTATTTTTGAAACAGGAATAAAAGTAGTAGATCTTTTAGCTCCTTATCGTCGTGGAGGAAAAATAGGACTTTTCGGTGGAGCTGGAGTGGGTAAAACAGTACTTATTATGGAATTGATCAATAACATTGCCAAAGCTCATGGAGGTGTATCTGTATTTGGCGGAGTAGGTGAGCGTACTCGTGAGGGAAATGATCTTTATATGGAAATGAAAGAATCTGGAGTAATTAATGAACAAAATATTGCAGAATCAAAAGTAGCTCTAGTATATGGTCAAATGAATGAACCGCCCGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCGGAATATTTTCGAGATGTCAAT 792 0.3952 MRIKPTTSGPEVSSLEKKNLGHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLKRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPTFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVN 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01218 264 Gene3D - 98 264 IPR027417 -
Lapu2g01218 264 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 19 97 IPR036121 GO:0046034|GO:1902600
Lapu2g01218 264 PANTHER ATP SYNTHASE 17 264 - -
Lapu2g01218 264 FunFam ATP synthase subunit beta, chloroplastic 18 97 - -
Lapu2g01218 264 Gene3D - 18 97 - -
Lapu2g01218 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 263 IPR027417 -
Lapu2g01218 264 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 152 262 IPR000194 GO:0005524
Lapu2g01218 264 FunFam AGAP012081-PA 98 217 - -
Lapu2g01218 264 Pfam ATP synthase alpha/beta family, beta-barrel domain 23 95 IPR004100 GO:0046034|GO:1902600
Lapu2g01218 264 CDD ATP-synt_F1_beta_N 19 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01218 Lapu-Chr2 22000966 22002419 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01218 94 260 Primary Pumps ATPases(2) AT1G20260 27.869 5.77e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01218 K02112 - ming:20832704 504.212