Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01217 ATGATGCCCCCTCAGCAAGAAAACGCTGTTACACCTACCATTCCGGTCATCTCCAACCGCCCGGAAAACAGCTCCGTCCACGCCGAACCACCTTCCTCCGCCGCCAATCACATTCAAAACAACCATAATTCTCAGCACCACCCACCACCTGCTTCACCACCCAGATTTTTTCAACAATCCCTTCGCCCCGTTACCCTCAAATTCGACGATGTTTCCTATAGCATAACTTTTGGAAGGGACAAGAATGGTTGTGTATCTTCTCAAGAACACAAGCACACAAGAACAGTGTTGAATGGTGTGAGTGGTATGGTGGGGCCAGGGGAGGTGATGGCAATGTTGGGTCCCTCAGGGAGTGGCAAGACCACTTTACTCACTGCCCTCGCTGGCCGTCTCGCCGGAAAACTCTCCGGCGCTGTGACGTATAACAACCACCCTTTCTCTAGCTCCATGAGGCGCAACATAGGGTTTGTGTCCCAAGACGATGTGTTGTACCCTCACCTCACTGTGATTGAGACTCTAACTTATGCTGCCATGTTGAAACTTCCAAAAAGTTTGACAAGGGAAGAGAAAATGGAGCAAGCTGAAATGGTCATTGGGGAACTAGGGTTGTCCCGGTGCCGAAACAACCCCGTCGGCGGTGGCGCCGCCTTGTTTCGGGGGATTTCAGGCGGCGAGCGAAAGCGGGTCAGCATAGGACAAGAGATGTTGGTGAACCCAAGTTTGTTGTTGCTTGATGAGCCAACATCAGGGTTGGACTCCACCACCGCACAACGCCTCGTGGCAATGCTTCATAGTTTTGCCCGAAACGGTCGGACGGTGGTGACCACCATTCATCAGCCTTCAAGCAGGTTGTATTGGATGTTTGATAAGGTGTTGTTGTTGTCGGACGGGTACCCGATTTTCACCGGACAAGCATGTCGGGCCATGGATTATCTTGATTCCATTGGGTTTGTGCCCAGTATCAATTTCATCAATCCAGCAGATTTTCTTCTTGACCTTGCTAATGGTATAGTGGTTGATGTCAAAGAAGATGAACATTTAGATCATCACGAGGATCAAGCTTCAATCAAACAATTCCTAGTTTCATCGTATAAAAAGAATCTATATCCTCTTCTAAAACAAGAGATTCAACAAAATAATAGAGAACTAGCATTTCTTGCTTCAAGAACATTTGGAAGTCCTGAGAACCAATGGACCACTAGCTGGTGGGAACAATTCATGGTTCTGCTTAAGAGAGGTTTAAAAGAGAGGAGGCATGAATCTTACTCTAGCCTAAGAATTTTCCAAGTCTTGTCTGTCTCAATTCTCTCAGGACTTCTATGGTGGCATTCTGATCCCTCACGTATACAAGACCAGGTAGGCCTGTTATTCTTCTTCTCCATCTTCTGGGGTTTTTTCCCTCTCTTCAATGCCATCTTTGCTTTTCCTCTGGATAGATCAGTGTTGATGAAAGAAAGATCATCAGGCATGTACCATTTATCCTCCTACTATGTTGCCAGAACAGTCGGGGACTTACCAATGGAGCTTGTGCTTCCTACTATCTTTGTAACAGTATCTTATTGGATGGGAGGTCTCAAGCCTTCTTTGGTTACATTTGTGTTTACTCTCTTGATCATGCTTCTCAATGTGCTAGTTTCTCAAGGAATAGGCCTAGCACTTGGTGCCATTCTGATGGATGTCAAACAAGCAACAACCTTAGCCTCAGTGACTATGTTGGTGTTTCTTTTAGCTGGGGGTTACTACATTCAACAAATTCCATTCTTCATATCTTGGTTGAAGTACATTTCTTTTAGTCACTATTGCTATAAGCTTCTTGCAGGAGTGCAATACTCAGTAAATGCGGTCTATGAGTGTGGACCAGGGTTACATTGTAAGATCAGAGATTTTCCTGCCATAAAGTGCCTAGGGCTTGATAATTTGTGGAAAGATGTGGTTGTATTGGCTATAATGTTGGTTGGCTATAGAGTTGTGGCATATCTAGCTTTGAGGAAGGGGCTACATCATTGA 2007 0.4559 MMPPQQENAVTPTIPVISNRPENSSVHAEPPSSAANHIQNNHNSQHHPPPASPPRFFQQSLRPVTLKFDDVSYSITFGRDKNGCVSSQEHKHTRTVLNGVSGMVGPGEVMAMLGPSGSGKTTLLTALAGRLAGKLSGAVTYNNHPFSSSMRRNIGFVSQDDVLYPHLTVIETLTYAAMLKLPKSLTREEKMEQAEMVIGELGLSRCRNNPVGGGAALFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQRLVAMLHSFARNGRTVVTTIHQPSSRLYWMFDKVLLLSDGYPIFTGQACRAMDYLDSIGFVPSINFINPADFLLDLANGIVVDVKEDEHLDHHEDQASIKQFLVSSYKKNLYPLLKQEIQQNNRELAFLASRTFGSPENQWTTSWWEQFMVLLKRGLKERRHESYSSLRIFQVLSVSILSGLLWWHSDPSRIQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRSVLMKERSSGMYHLSSYYVARTVGDLPMELVLPTIFVTVSYWMGGLKPSLVTFVFTLLIMLLNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQIPFFISWLKYISFSHYCYKLLAGVQYSVNAVYECGPGLHCKIRDFPAIKCLGLDNLWKDVVVLAIMLVGYRVVAYLALRKGLHH* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01217 668 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 35 659 - -
Lapu2g01217 668 ProSitePatterns ABC transporters family signature. 221 235 IPR017871 GO:0005524|GO:0016887
Lapu2g01217 668 FunFam ABC transporter G family member 22 84 315 - -
Lapu2g01217 668 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 66 321 IPR003439 GO:0005524
Lapu2g01217 668 MobiDBLite consensus disorder prediction 1 46 - -
Lapu2g01217 668 Pfam ABC transporter 97 249 IPR003439 GO:0005524
Lapu2g01217 668 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 313 IPR027417 -
Lapu2g01217 668 SMART AAA_5 106 299 IPR003593 GO:0016887
Lapu2g01217 668 Pfam ABC-2 type transporter 278 346 IPR043926 GO:0140359
Lapu2g01217 668 Gene3D - 79 313 IPR027417 -
Lapu2g01217 668 MobiDBLite consensus disorder prediction 1 56 - -
Lapu2g01217 668 Pfam ABC-2 type transporter 404 609 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01217 Lapu-Chr2 21976553 21981425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01217 96 282 Calmodulin-binding Proteins AT2G36910 30.964 3.88e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01217 K05681 - gmx:100810165 1092.03