Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01212 ATGAGGGGTGAAAGAAGGAAGTTGCGTCTTAGCAAAATCTATTCATTTGCATGTGGGAAACAGTCTCTCAAGGAGGATCATTCGCAGATAGGAGGAAGAGGGTATTCCAGGGTGGTGTTTTGCAATGAACCAGAGAGCTTTGAGGCTGGGATAAGGAGTTATGCTGACAATTCTGTGAGCTCTACAAAGTATAATCTTGCCACTTTCTTGCCTAAGTCACTTTTTGAGCAGTTTAGGAGGGTGGCTAATTTCTATTTTTTGGTAACTGGCATCTTGGCCTTCACAGAGCTTGCTCCTTATACAGCTGTCAGTGCTATCCTTCCTCTGATTATTATTATTGGAGCAACTATGATCAAAGAGGGTATTGAAGATTGGCGAAGGAAACAGCAGGATATTGAGGTGAATAGTAGAAGAGTTAAAGTGCATACAGGGCAAGGAACTTTTGAATATACTGAGTGGAAGAATCTGAAGGTGGGGCATATAGTGAAGATAATGAAGGACGAATTCTTTCCTGCAGACCTCCTACTGCTTTCTACCAGTTACGAGGATGCAATCTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATTTGAAGTTAAAACAAGGGTTGGAAGTAACTTCTTCCTTACACGAGGACTTTCAATTAGGTGATTTTAAAGCAACAATCAAGTGTGAAGACCCAAATGCAAATTTATATTCATTTGTTGGGAGCATGGAGTATGAAGAACAGCAGTATCCTCTTTCTCCTCTGCATCTTCTTCTGAGAGACTCTAAACTTCGTAACACAGATTATATATTTGGAGCTGTCATCTTCACTGGTAATGACACAAAGGTCATTCAGAATTCCACTAATGCCCCTTCAAAGAGAACAAAGGTTGAGAAGAAGATGGATAGGGTTATCTACTTCATGTTTTGTATTGTGTTTCTAATGGCATTTGTTGGATCTATTTTCTTTGGCGTTGCAACTAAAGATGACTTGGACAATGGATTGATGAAAAGGTGGTACCTAAGACCAGATGACTCTACAATTTTCTTTGATCCTGAAATAGCACCAGCTGCTGCTATATTTCATTGTTTGACAGCCTTAATGTTATATGGTTTCTTCATTCCCATCTCATTGTATGTTTCAATAGAAATTGTCAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCAATATGTACTATGAAGATGCAGACAAACCAGCCCATGCCCGTACATCAAACTTGAATGAGGAACTTGGCCAAGTTGATACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCGATGGAGTTCATCAAATGTTCCATTGCTGGGGTAGCTTATGGCCGTGGTGTTACAGAGGTTGACAGAGCAATGGATAGAAAAAGTGGTTCTTCTTTGATTGATAATTCAAGGGACTCTCCTGTAAGAAATGCTCCCATCAAAGGATTTAACTTTACAGATGAAAGGATAATGAATGGAAAATGGGTTAATGAGCCTTCTGCAAATGTTATTAACAAATTTTTTCACTTATTGGCAATCTGCCATACAGCCCTACCAGAAGTTGATGAAGAAACAGGAAATGTCTCATACGAAACTGAATCTCCAGATGAATCAGCATTTGTGATTGCGGCGAGAGAAATTGGTTTTGAATTCTATAAAAGGACTCAGACCAGTTTATCAATGTATGAATTGGATCCAGTTTCTGGTGACAAAATTGAACGGACATACAAGCTTCTCAATGTTTTAGAATTCAGTAGCTCAAGGAAGCGAATGTCAGTGATTGTGAAAGATGAAGAAGGGAGAATTTTGTTACTCTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTGCCAAGGATGGGAGGGAGTTTGAAGAGAAAACCTCAGAACATGTGGATGAATATGCTGATGCAGGTCTAAGGACTCTAATTCTGGCATATCGTGAACTTGATGAAAACCAATACAAGGAGTTTGATGATAAACTTTCTCAAGCAAAAAATTCAGTTAGTTTAGATAGGGAAACACTGATTGAGGAAATATCAGACAAGATCGAAAGAAATCTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAAATGGGGTTCCTGAATGCATTGACAAGCTTGCCCAAGCTGGAATTAAGATCTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTTTGCTTGTAGTTTACTTAGACAAGGAATGAAACAAATTATAATTCAATTAGAAACTCCAGAAATTCAAGCATTGGAGAAGGCTGGAGACAAGGTGGCTATTGCTAAGGCTTGTAGAGAAAATATCCGCCATCAAATATCTGAAGCTGCTCAGCAGCTTACTGCCTCCAGAGGAACCTCTCAGCAAGCATTTGCTCTAATTATTGATGGAAAATCACTTGCTTATGCTCTAGAGGATAATATAAAGAACATGTTTCTAGATCTTGCAATTCGTTGTGCATCTGTTATCTGCTGCCGTTCCTCACCAAAGCAGAAGGCACTGCATTTAAAAGTAATGTTCTATTTATTGGTTCCTCTCTTAAAGGTCACTAGACTGGTAAAATCTGGTACTGGTAAAACTACATTAGCTATTGGTGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGGATTGGAATCAGTGGCGTTGAAGGAATGCAGGCGGTTATGTCTAGTGATATTGCCATTGCACAGTTCCGTTATTTGGAAAGGTTACTTCTTGTACATGGACATTGGTGTTACCGAAGGATCTCTTCAATGATATGCTATTTCTTCTACAAAAACATCACATTTGGCTTTACTCTATTCTTATATGAGGTGTATGCATCATTCTCTGGGCAACCCGCATACAATGACTGGTTTTTGTCAGTCTATAATGTCTTCTTTTCGTCACTTCCTGTGATTGCTCTTGGGGTCTTTGACCAGGATGTGTCTGCTCGGTACTGCCTGAGGTTTCCTATGTTATATCAAGAAGGTGTGCAAAATCTTCTCTTTAGCTGGCGGCGAATTTTCAGCTGGATGCTTAATGGCTTTATCAGTGCCATAATAATTTTCTTTTTCTGCACAAAGGCAATGGAGATTCAAGCGTTTGATGAGAAGGGAAGAACTGCTGGGAGGGATATACTCGGAGCAACAATGTATACTTGTGTGGTTTGGGTTGTGAACTTGCAAATGGCTGTATCTATAAATTACTTCACCTTGATTCAACATATTTTCATCTGGGGTTCCATTGCTATCTGGTACCTTTTCCTCCTGGCATATGGAGCAATGTCTCCCAGCATTTCGGGAAATGCTTACAAAGTCTTCGTTGAAACTCTTGCTCCATCGCCTTCCTTTTGGATTGTGACATTAGTTGTTGTGATCTCAACACTTATCCCATACTTCTCTTACTCAGCAATACAGATGAGATTCTTTCCCATGTATCACGAAATGGTACAATGGATAAGGCATGATGGAAAGACAAATGATCCTGAATTCATCGCTATGGTGCGACAAGGATCATTGCGGCCAACAACTGTCGGTTCAACAGCTCGCTTAGCGGCTAAGGATAATGACTTCAAAGATAGTTCAACTAACCATAGATAG 3612 0.3989 MRGERRKLRLSKIYSFACGKQSLKEDHSQIGGRGYSRVVFCNEPESFEAGIRSYADNSVSSTKYNLATFLPKSLFEQFRRVANFYFLVTGILAFTELAPYTAVSAILPLIIIIGATMIKEGIEDWRRKQQDIEVNSRRVKVHTGQGTFEYTEWKNLKVGHIVKIMKDEFFPADLLLLSTSYEDAICYVETMNLDGETNLKLKQGLEVTSSLHEDFQLGDFKATIKCEDPNANLYSFVGSMEYEEQQYPLSPLHLLLRDSKLRNTDYIFGAVIFTGNDTKVIQNSTNAPSKRTKVEKKMDRVIYFMFCIVFLMAFVGSIFFGVATKDDLDNGLMKRWYLRPDDSTIFFDPEIAPAAAIFHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDINMYYEDADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVDRAMDRKSGSSLIDNSRDSPVRNAPIKGFNFTDERIMNGKWVNEPSANVINKFFHLLAICHTALPEVDEETGNVSYETESPDESAFVIAAREIGFEFYKRTQTSLSMYELDPVSGDKIERTYKLLNVLEFSSSRKRMSVIVKDEEGRILLLCKGADSVMFERLAKDGREFEEKTSEHVDEYADAGLRTLILAYRELDENQYKEFDDKLSQAKNSVSLDRETLIEEISDKIERNLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIQLETPEIQALEKAGDKVAIAKACRENIRHQISEAAQQLTASRGTSQQAFALIIDGKSLAYALEDNIKNMFLDLAIRCASVICCRSSPKQKALHLKVMFYLLVPLLKVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSVYNVFFSSLPVIALGVFDQDVSARYCLRFPMLYQEGVQNLLFSWRRIFSWMLNGFISAIIIFFFCTKAMEIQAFDEKGRTAGRDILGATMYTCVVWVVNLQMAVSINYFTLIQHIFIWGSIAIWYLFLLAYGAMSPSISGNAYKVFVETLAPSPSFWIVTLVVVISTLIPYFSYSAIQMRFFPMYHEMVQWIRHDGKTNDPEFIAMVRQGSLRPTTVGSTARLAAKDNDFKDSSTNHR* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01212 1203 CDD P-type_ATPase_APLT_Dnf-like 56 1019 - -
Lapu2g01212 1203 Gene3D - 115 285 - -
Lapu2g01212 1203 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Lapu2g01212 1203 PRINTS P-type cation-transporting ATPase superfamily signature 870 889 - -
Lapu2g01212 1203 Pfam Phospholipid-translocating P-type ATPase C-terminal 898 1148 IPR032630 -
Lapu2g01212 1203 FunFam Phospholipid-transporting ATPase 115 285 - -
Lapu2g01212 1203 NCBIfam phospholipid-translocating P-type ATPase 54 1155 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lapu2g01212 1203 SUPERFAMILY Calcium ATPase, transduction domain A 142 282 IPR008250 -
Lapu2g01212 1203 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 430 654 IPR023299 GO:0000166
Lapu2g01212 1203 Pfam Cation transport ATPase (P-type) 523 617 - -
Lapu2g01212 1203 FunFam Phospholipid-transporting ATPase 691 910 - -
Lapu2g01212 1203 FunFam Phospholipid-transporting ATPase 533 691 - -
Lapu2g01212 1203 Pfam Phospholipid-translocating ATPase N-terminal 39 105 IPR032631 -
Lapu2g01212 1203 SUPERFAMILY HAD-like 418 925 IPR036412 -
Lapu2g01212 1203 Gene3D - 536 690 IPR023299 GO:0000166
Lapu2g01212 1203 SFLD Haloacid Dehalogenase 405 921 - -
Lapu2g01212 1203 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1148 IPR023298 -
Lapu2g01212 1203 Gene3D - 691 910 IPR023214 -
Lapu2g01212 1203 NCBIfam HAD-IC family P-type ATPase 828 952 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu2g01212 1203 SFLD p-type atpase 405 921 IPR044492 -
Lapu2g01212 1203 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 1159 - -
Lapu2g01212 1203 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01212 Lapu-Chr2 21844562 21851697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01212 8 1198 Primary Pumps ATPases AT1G68710 71.149 0.0 1845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01212 K01530 - gmx:100811892 2185.61