Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01194 ATGTCCACTGATAAAATGATAGTTAGAATGCTAAGAGAGAACTGTTCAATGGGAAAAGACACTTCCGAATCCGATTCCCATCACAAACGTCTTGGTCTTTTAAAAGATCAAGTTCACTTGGTTAAAAGGAAAGACTGTGATCGCCATGAGATTGCTCCAATCCAAGACCAACTATCATTTGAGAAGGGTTTTTTCATTGTAATTCGGGCATGCCAATTGTTAGCCCAAAAGAATGATGGAATAGTATTGGTAGGGGTGGCAGGTCCTTCTGGGGCGGGCAAGACTGTATTTACTGAAAAGATACTCAACTTCATGCCCAGCATTGCTGTCATTTCAATGGATAATTACAATGATTCCAGTCGAATTGTTGATGGAAACTTTGATGATCCACGCTTAACAGATTACGATACATTACTCCAGAATTTACATGATTTAAAGGAAGGAAAGCCTGTTGAAGTTCCCATATATGATTTCAAGTCCAGTTCTCGAACAGGATACAGGACAGTAGAAGCCCCGACTTCTCGAATCGTGATTATAGAGGGAATCTATGCCTTGAGTGAAAAGTTGCGACCTCTGCTGGACCTTCGAGTCTCTGTTACAGGAGGAGTTCACCTTGACCTTGTAAAACGAGTTATACGGGATATTCAACGTGCTGGTCAAGAACCTGAAGAAATTATTCATCAAATATCTGAAACGGTGTATCCAATGTACAAGGCCTTTATTGAGCCAGATCTCCAGACGGCACATATAAAAATCATCAACAAATTCAATCCATTTACTGGATTCCAGAGCCCGACTTACATATTGAAGTCAGGGAAGAATCTAGCAGTGGATAAAATTAAAGCTGTTCTCTCTGAGGATTTTAAGGAATCAACAGAGCAAACTTATGACATATATCTTCTACCACCTGGTGAAGATCCAGAAACTTGCCAATCATATTTGCGAATGCGAAATAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTCACAGATAACCCATTTGTCATTTCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGTGGACTAATGGCTTTGGGATACACAATAGCCACTATCCTTAAGAGAAACAGTCATGTTTTTTCTGATGATAGGGTTTGTGTGAAACTTGATTGGCTTGAGCAACTCAATAGAAATTATGTTCAGGTACAAGGAAGGGATCGCTTGGTTTTAAAATGCATAGGACAGCAGCTAGGTCTAGATGGTTCCTACATTCCTCGTACCTATATTGAGCAAATTCAAATTGAAAAACTTGTGGATGAGGTTATGGCCCTGCCAGATGATTTGAAGACAAAGCTCAGCCTAGATGAGGATTTGGTGTCAAGCCCCAAAGAAGCACTTTCTAGAGCCTCTGCTGACAGAGTTGCCCTGAGAAATAAACATCTGAGGAGTGGAATATCACAGTCATATACCAATCAAAGGGACAAAAACCTTTCCAAGGTTACTGGATATGGTGCAAACAGCAGAAGGTTTGGTGAAAGAAATTCAGAGTCCAGCACAATGTCAATTAATCAGGGAGCCATGAATCAGCTTTCAGACCAAATTTCTGCCCTCAATGATAGAATGGATGAGTTTACAAATCGCATCGAAGAACTGAATTCCAAGTTAAACACCAAGAGAAATTCTCCAAGCCAACAAAATATGTCACTTCAAGCTGAGGCATGCAATGGATCTGCTCCCACCTCATACTTCATCACTAGTTTGGGCAATGGTTCCCTAACTGGATCTAAAATGGCAAATTCTTCTTCGTCATCACAATTAACTAAGGATTCTCCTTTAATGGATGAGATATCAAGCATTGCACGCAGTCAGCGTCAGATCATGCATCAATTGGACAATCTCAATAATCTTCTCAGGGGGAGCTCAGGGGAGAAGTCTCACCAAACAAGAACTAACCAGAGAAACGTAGATAAGGCAACAGATTCCATGGGAGCTTCTGTTATGGTAGTGGTGGCAGTTGGTTGTTTGGGGATCTTCTTGATGAAGGGTTTGTTGAACCGAAATTGA 2040 0.4093 MSTDKMIVRMLRENCSMGKDTSESDSHHKRLGLLKDQVHLVKRKDCDRHEIAPIQDQLSFEKGFFIVIRACQLLAQKNDGIVLVGVAGPSGAGKTVFTEKILNFMPSIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNLHDLKEGKPVEVPIYDFKSSSRTGYRTVEAPTSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSGKNLAVDKIKAVLSEDFKESTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVCVKLDWLEQLNRNYVQVQGRDRLVLKCIGQQLGLDGSYIPRTYIEQIQIEKLVDEVMALPDDLKTKLSLDEDLVSSPKEALSRASADRVALRNKHLRSGISQSYTNQRDKNLSKVTGYGANSRRFGERNSESSTMSINQGAMNQLSDQISALNDRMDEFTNRIEELNSKLNTKRNSPSQQNMSLQAEACNGSAPTSYFITSLGNGSLTGSKMANSSSSSQLTKDSPLMDEISSIARSQRQIMHQLDNLNNLLRGSSGEKSHQTRTNQRNVDKATDSMGASVMVVVAVGCLGIFLMKGLLNRN* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01194 679 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 252 IPR027417 -
Lapu2g01194 679 PANTHER URIDINE KINASE 33 439 - -
Lapu2g01194 679 Gene3D - 82 263 IPR027417 -
Lapu2g01194 679 MobiDBLite consensus disorder prediction 485 509 - -
Lapu2g01194 679 SUPERFAMILY CYTH-like phosphatases 289 423 IPR033469 -
Lapu2g01194 679 Pfam Phosphoribulokinase / Uridine kinase family 84 252 IPR006083 GO:0005524|GO:0016301
Lapu2g01194 679 ProSiteProfiles CYTH domain profile. 261 426 IPR023577 -
Lapu2g01194 679 Pfam CYTH domain 286 420 IPR023577 -
Lapu2g01194 679 Gene3D - 271 428 - -
Lapu2g01194 679 MobiDBLite consensus disorder prediction 630 649 - -
Lapu2g01194 679 CDD UMPK_like 83 255 - -
Lapu2g01194 679 Coils Coil 519 553 - -
Lapu2g01194 679 PRINTS Uridine kinase signature 81 98 - -
Lapu2g01194 679 PRINTS Uridine kinase signature 148 163 - -
Lapu2g01194 679 PRINTS Uridine kinase signature 240 253 - -
Lapu2g01194 679 PRINTS Uridine kinase signature 204 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01194 Lapu-Chr2 21214565 21226877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01194 83 252 PRT Gene Family AT5G40870 28.177 4.37e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01194 K00876 - gmx:100781286 1186.02