Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01169 ATGAAAAATATGCAAGGCTTCAAGACAGCACAACCAAGTTCACAACTCTACTGCCACTCCTCGTTTTTGCTTCGGGGAAACGACACCAACCGAAATCCAACCAGGTTCTGTGATCTTGGGAACCTGCACCATTCCTCTGCCGTTTTTCATCAAGAAGATGGTGTTGATTTAAGCTCAAGTTCTGTCTTTAGTGTGAAATCAAGCAATGTTGTTGGTGGCAGTAACATGCAATATGGGACACTGAGCACGAATGTTGGGTCTGCGGAGATTGGTTCAAGTGAGGGAGGGTGCATGGATACAGGGCTGCAACTGATGTACCACAAAGGAGTGGCAACCTTGCCTTTGGGGAATGGTCATGTTGATTGGGCTGATTCAGGCATAGCTGATAATAGCCAACAAACTGATGATACTTCCACAGATATTGACACTGATGATAGAATCCAATGCAATAGAGTTAAGAATGGATCGCGTATGGTTTTGCACTCCAAGGCTCAGACAAAGGTCAAACCTGAAGATCAGAAGACCCTTCGTAGACTGGCTCAGAATCGGGAGGCTGCAAGGAAGAGTCGGTTGAGGAAAAAGGCATATGTACAGCAATTGGAGAACAGCCGAGTCAAGCTTGTTCAATTAGAGCAAGAACTTCAACGAGCACGTCAGCAGGGTATATTTATTGCGACTCAAGGGGATCAGGGTCATTTCGCTGTTGGAAATGGTGCCTTAGCATTTGACATTGACTATGCTCACTGGGTTGATGAGCACCAACGTATGCTCAGTGATCTAAGATTGGCTGTAAATTCTCAAATGAGTGATGATGAGTTACATATCCTTGTTGAAGGTGTCATGGAACATTATAATGAGTTATCCAGGTTAAAGAGCATAGGAGCAAAGGCTGATATATTTCACATACTATATGGAATGTGGAAAACACCGGTGGAAAGACGTTTTATGTGGCTTGGTGGTTTCCGTTCATCTGAACTACTCAAGATCATCAAGAACCACCTTGAGCCATTGACAGAGCAGCAGTTGTTGGGAATTTGTAATCTGCAACAATCTTCTCACCGGTCTGAGGATGCTTTAGATCAAGGTATGGAACAATTGCAGCAATATCTTGTGGAAACACTTTCCTCCACCTCCTTAGGACCCAATGGTAGTGGAGATGTTGCTGATTACATGGGCCAAATGGCTCTTGCAATGAGCAAGCTTGCTGAGCTGGAGATTTTTCTTTCCCAGGCTGACCACTTGAAGCAACATACTTTTCAACAGTTGCAACAAATTTTGACGACGCGTCAAACCGCCCGAGCCCTCCTTGTCCAAAATGATTTCATTTCAAGACTAAGAGCACTTAGTTCATTATGGTTGGCACGCCCAAGAGAATAG 1377 0.4437 MKNMQGFKTAQPSSQLYCHSSFLLRGNDTNRNPTRFCDLGNLHHSSAVFHQEDGVDLSSSSVFSVKSSNVVGGSNMQYGTLSTNVGSAEIGSSEGGCMDTGLQLMYHKGVATLPLGNGHVDWADSGIADNSQQTDDTSTDIDTDDRIQCNRVKNGSRMVLHSKAQTKVKPEDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRVKLVQLEQELQRARQQGIFIATQGDQGHFAVGNGALAFDIDYAHWVDEHQRMLSDLRLAVNSQMSDDELHILVEGVMEHYNELSRLKSIGAKADIFHILYGMWKTPVERRFMWLGGFRSSELLKIIKNHLEPLTEQQLLGICNLQQSSHRSEDALDQGMEQLQQYLVETLSSTSLGPNGSGDVADYMGQMALAMSKLAELEIFLSQADHLKQHTFQQLQQILTTRQTARALLVQNDFISRLRALSSLWLARPRE* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01169 458 Coils Coil 193 220 - -
Lapu2g01169 458 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 177 192 IPR004827 GO:0003700|GO:0006355
Lapu2g01169 458 Pfam Seed dormancy control 257 331 IPR025422 GO:0006351|GO:0043565
Lapu2g01169 458 SMART brlzneu 170 239 IPR004827 GO:0003700|GO:0006355
Lapu2g01169 458 Pfam bZIP transcription factor 173 213 IPR004827 GO:0003700|GO:0006355
Lapu2g01169 458 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 172 216 IPR004827 GO:0003700|GO:0006355
Lapu2g01169 458 FunFam BZIP family transcription factor 173 222 - -
Lapu2g01169 458 PANTHER TRANSCRIPTION FACTOR TGA9 125 458 - -
Lapu2g01169 458 Gene3D - 173 222 - -
Lapu2g01169 458 SUPERFAMILY Leucine zipper domain 174 217 IPR046347 GO:0003700|GO:0006355
Lapu2g01169 458 CDD bZIP_HBP1b-like 174 226 - -
Lapu2g01169 458 ProSiteProfiles DOG1 domain profile. 239 455 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01169 Lapu-Chr2 20508236 20512869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01169 7 458 bZIP Transcription Factor Family AT1G68640 53.319 1.50e-154 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu2g01169 DOG1 3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01169 K14431 - gmx:100797393 692.189