Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01151 ATGGCCACTGTTGCAACTACAGGAATTGGAGTAGGAGTAACAAAGCTCCAACCCCACAAACCAAAGCACAAGTCCTTGTTTCTTGGCCAGAGGCTTAGGATTAGACCCTCTTGGGAGGCACAATGCAGTGCAAGATTCAATGTCTCAAACCCAAGAGTGGTTCAAGTTTTTGCACTAGGGGGTGAATGGATTGACACAGTTCACAACCTTTTTGTGGGTGTTGGGGTTGGACTTCCTTGCAGTGTGATGCAGTGTGGAGATGTAATCTATAGGAGCACTCTTCCCAAGTCCAATGCCTTGACACTTACTGTACCTGGGGTGATTCTGGCTATGGGGACTCTATCTTACCTTTGGGCCACACCTGGTGTGGCACCTGGTTTCTTTGACATGTTTGTTCTTGCCTTTGTTGAGAGGTTGTTCCGACCCAGTTACAAGAAGGATGATTTTGTTCTGGGGAAGAAGTTGGGGGAGGGATCATTTGGAGTGGTTTATAGAGTGTCACTGGCCAACAAACCCTCTTCAAAGGAAGGTGACTTAGTCTTGAAGAAGGCGACTGAGTATGGTGCGGTAGAAATTTGGATGAACGAGCGTGTACGAAGAGCTTGTGCAAGCAGCTGTGCAGATTTTGTTTATGGTTTTCTTGAGAGCTCTTCAAAGAAATCTGCTGAATACTGGCTTATATGGCGGTTTGAAGGGGATGCCACCCTAGCTGACTTGGTTCAGAGTCGAGAGTTTCCATATAATGTTGAAACATTAATTTTGGGTGAGGTTCAAGATTTGCCCAAAGGATTGGAAAGAGAAAATAGAATCATTCAAACAATCATGAGGCAGATCTTGTTTGCACTGGATGGTCTTCACTCAACTGGTATTGTACATAGGGATATTAAGCCACAGAACATTATTTTCTCCGAAGAGTCTCGTACATTCAAAATCATTGATCTTGGAGCTGCTACAGACCTGCGAGTGGGCATAAACTACATTCCAAAGGAGTTTCTTTTGGATCCAAGATATGCTGCACCAGAGCAGTACATCATGAGCACACAAACTCCTTCAGCACCCTCAGTTCCAGTTGCAACTGCACTTTCCCCAGTCTTATGGCAGTTGAATTTGCCGGACAGATTTGACATCTACAGTGCTGGTTTAATCTTTCTTCAAATGGCTTTCCCTGGTCTACGGTCTGATAATAGCCTCGTTCAGTTCAACCGCCAATTAAAGAGGTGTGACTATGACATAGTTGCATGGAGAAAAACTATAGAGTCTCGATGTGGCCCTGAACTGAGGAGGGGCTTTGAGCTGTTGGATTTGGATGGTGGAATAGGATGGGAACTCCTAAAATCAATGGTAAGGTACAAAGCAAGACAAAGGCTGAGTGCAAAAGCAGCATTGGCTCATCCTTACTTTGACAGAGAAGGCTTGTTGGCATTGTCTTTCATGCAAACACTGAGGCTGCAGCTCTTGCGTGCAACTCAGCAGGACTATGGAGAAGCTGCCAAGTGGATTACTAATCTAATGGCAAAGTCAGGGACACAGAAAGATGGTGGATTCACTGAAGCTCAGCTTCAAGAACTGAGAGAAATTGAACCCAAAAAGAAGGCTAGTGCACCAAGAAATGCTCTAGCTTCAGCCCTTAAACTTCAGAGGAAAATTATAAGAACCTTAAATGAGAGTATGGATGAGCTCAACAGACGCAGGAAAAGCTTCTGGTGGAGCAGATGGATCCCAAGAGAAGAATGA 1734 0.4481 MATVATTGIGVGVTKLQPHKPKHKSLFLGQRLRIRPSWEAQCSARFNVSNPRVVQVFALGGEWIDTVHNLFVGVGVGLPCSVMQCGDVIYRSTLPKSNALTLTVPGVILAMGTLSYLWATPGVAPGFFDMFVLAFVERLFRPSYKKDDFVLGKKLGEGSFGVVYRVSLANKPSSKEGDLVLKKATEYGAVEIWMNERVRRACASSCADFVYGFLESSSKKSAEYWLIWRFEGDATLADLVQSREFPYNVETLILGEVQDLPKGLERENRIIQTIMRQILFALDGLHSTGIVHRDIKPQNIIFSEESRTFKIIDLGAATDLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSVPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPGLRSDNSLVQFNRQLKRCDYDIVAWRKTIESRCGPELRRGFELLDLDGGIGWELLKSMVRYKARQRLSAKAALAHPYFDREGLLALSFMQTLRLQLLRATQQDYGEAAKWITNLMAKSGTQKDGGFTEAQLQELREIEPKKKASAPRNALASALKLQRKIIRTLNESMDELNRRRKSFWWSRWIPREE* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01151 577 Gene3D Phosphorylase Kinase; domain 1 136 229 - -
Lapu2g01151 577 ProSitePatterns Protein kinases ATP-binding region signature. 155 182 IPR017441 GO:0005524
Lapu2g01151 577 Pfam Protein kinase domain 151 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01151 577 CDD STKc_SNT7_plant 153 467 - -
Lapu2g01151 577 SMART serkin_6 149 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01151 577 Coils Coil 543 563 - -
Lapu2g01151 577 ProSiteProfiles Protein kinase domain profile. 149 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01151 577 FunFam Serine/threonine-protein kinase STN7, chloroplastic 258 472 - -
Lapu2g01151 577 Gene3D Transferase(Phosphotransferase) domain 1 258 471 - -
Lapu2g01151 577 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 56 552 - -
Lapu2g01151 577 SUPERFAMILY Protein kinase-like (PK-like) 145 472 IPR011009 -
Lapu2g01151 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01151 Lapu-Chr2 20074091 20083155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01151 267 468 Core Cell Cycle Gene Families AT2G38620 29.091 2.69e-16 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Lapu2g01151 Pkinase 1.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01151 - - gmx:100778588 1055.05