Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01146 ATGGTAGTTTTTGTAACAACCCAGGTTGTGTTATCTGATGACAACACCCCAATGCCTCCTGATAAGACACAATTAGGATCATGGTTTAATACTCATGTAGGGAGTTTAGATAAAAGAAAGGGTACCCTAGACCCTGCATTAGTGGCTGCTGAAGAAGGTGCCAAGGTGGTGAAGGTAAGGCAAGATGGCAGTGGGGACTTCAAGACCATCACTGATGCCGTTAAAAGCGTACCTTCTGGGAACACCAAGCGTGTAATTTTGCACATTGGACCTGGAAATTACGAAGAGAAAGTCACAATTCAGAAGACACAACCTTTCATCACCTTCTACGGACAACCAGGGAAAATGCCAAACTTGACCTATGCAGCCACAGCAAAAAACTATGGCACTGTTGATAGTGCGACATTGATTGTTTTATCAGACTACTTTGTGGCGTCAAACATAATATTCTCGAATTGTGAAATAAAAACACTTGGCGATGAAGGGCTTACTTTTATAACAGCACAAGCAAGAAAAAATAAGAAAGAGGACAATGGCTACTCCTTTGTACATTGTGAACTTACCGGAACTGGAACTGGTTCTTACCTGGGCAGAGCGTGGTTTGGTTATTCCACAGTGATCTTTGCTTACACTAACATGGGCAACATTTTCGACAAGGAAGCTTGGAGTAACAACAATCACCCTGAATATGACAAAACTCTTTATTTCGGGGAGTATAAGAACACAGGACCTGGTGCAGATGCCACAGGACGTTCTCCACTGACAAGGCAACTCAGTGACGCAGAGGTCAAACCATACCTAACTCTTGGTATGCTACAAGGCTCCAAATGGATACTTCCTCCTCCCAAACTCTAA 855 0.4316 MVVFVTTQVVLSDDNTPMPPDKTQLGSWFNTHVGSLDKRKGTLDPALVAAEEGAKVVKVRQDGSGDFKTITDAVKSVPSGNTKRVILHIGPGNYEEKVTIQKTQPFITFYGQPGKMPNLTYAATAKNYGTVDSATLIVLSDYFVASNIIFSNCEIKTLGDEGLTFITAQARKNKKEDNGYSFVHCELTGTGTGSYLGRAWFGYSTVIFAYTNMGNIFDKEAWSNNNHPEYDKTLYFGEYKNTGPGADATGRSPLTRQLSDAEVKPYLTLGMLQGSKWILPPPKL* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01146 284 Gene3D - 6 148 IPR012334 -
Lapu2g01146 284 SUPERFAMILY Pectin lyase-like 54 278 IPR011050 -
Lapu2g01146 284 Gene3D - 149 281 IPR012334 -
Lapu2g01146 284 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 149 278 - -
Lapu2g01146 284 Pfam Pectinesterase 149 252 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01146 Lapu-Chr2 19951114 19952536 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01146 1 282 Carbohydrate Esterase AT5G07420 38.968 5.94e-87 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01146 K01051 - jre:108998818 282.722