Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01096 ATGGTGATCGAGCATGACATTGAGAGCTGCGGGAGCAGAGCGGTGCAGTTGTCACACGCTCACAACCCTCGCCACCACCGCCAGAAGCTGGAGGTGTACAATGAGGTGCTGCGGCGGATTCAGGATTCCGATTGCGAGGAGGCTCACGTTCCCGGCTTCGATGATCAGCTCTGGCTTCACTTCAACCGCCTTCCTGCTAGGTACGCGTTGGATGTGAATGTGGAGAGGGCAGAAGATGTTCTAGCTCATAAGAGATTGCTCAATTTGGCGGAGGACCCTGCTTCTCGACCTGCATTTCAAGTTCGCTTAGTACAGGTATATCCCTTTGGTGGTGCAAATTATGCTGATTCCATGCATTCAGATCCTTCTGAAATAGAAGATGCACAGAGTTCTCTTAACTATTCTTTAAAACAGGGAATCCATGCACCACCTACATTTGGTTCATCCTCTAATCTTGAAGCTCTTGCACTTCAATCAACCAAAAATAACATTGAGGATGGGGGAAGTGCTATGAGTGTAACACCATATTTTCACAGGCCGATGCACGAGATTACCTTTTCAACTGTTGACAAGCCTAAACTCCTTAGTCAGTTAACATCCATCCTTGGTGAGATGGGACTGAATATTCAAGAAGCTCATGCTTTTTCCACCACTGATGGATTTTCTCTGGATGTCTTTGTTGTGGAGGGATGGCCCAATGAGGAAACTGAGGAGCTGAAAGGTGTGTTAGAAAAGGAAATTTACAAGGTTAAGGAGCAAAATATGTCAAATCAGGGCATACATTATGCTGCCAATGAACATTACCAGACAAGGATGGAACCATCCCCTCATTGCATTCAAATACCAACTGATGGAGCTGATGTGTGGGAACTTGATACCAACCAGATAAAATATGAAAACAAAGTTGGCTCTGGGTCATTTGGTGACTTGTACAGAGGTACATATTGCAGTCAAGATGTAGCTATCAAAGTTCTCAAGCCTGAGCGCATAAGTACAGATATGCTGAAGGAGTTTGCACAAGAAGTTTATATCATGAGGAAGATTCGACACAAGAATGTTGTTCAGTTCATCGGCGCATGTACCAGGCCCCCAAATCTTTGTATCGTTACTGAGTTTATGTCTAGGGGAAGCTTATATGACTTTCTGCACAAACAAAGAGGTGTATTTAAGCTTCCATCTTTGCTAAAAGTAGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATTATTCACAGGGACCTCAAGACTGCCAATCTTCTGATGGATGAAAATGAAGTGGTCAAGGTTGCTGATTTTGGGGTTGCTAGAGTCCAAAGTCAGTCTGGCGTTATGACGGCTGAAACTGGAACATACCGATGGATGGCTCCTGAGGTCATTGAACACAAACCATATGACCAGAAGGCAGATGTTTTCAGTTTTGGAATAGCGCTCTGGGAGCTTTTAACTGGAGAACTACCTTACTCTTGCTTGACCCCATTACAAGCAGCAGTCGGCGTGGTGCAGAAGGGCCTAAGGCCTACAATTCCAAAAACCGCATACCCAAGACTTTCTGAACTGCTTCAGCGGTGCTGGCAACAAGATCCGACTCTAAGACCAGATTTCTCTGAAATAATAGAAATTCTTCAACACATAGCAAAAGAGGTCAATGATCACAAGGATAAATCATCCCATGGCTTTCTCTCAGCTCTTAGACGGGTCCATCATTGA 1719 0.4439 MVIEHDIESCGSRAVQLSHAHNPRHHRQKLEVYNEVLRRIQDSDCEEAHVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLNLAEDPASRPAFQVRLVQVYPFGGANYADSMHSDPSEIEDAQSSLNYSLKQGIHAPPTFGSSSNLEALALQSTKNNIEDGGSAMSVTPYFHRPMHEITFSTVDKPKLLSQLTSILGEMGLNIQEAHAFSTTDGFSLDVFVVEGWPNEETEELKGVLEKEIYKVKEQNMSNQGIHYAANEHYQTRMEPSPHCIQIPTDGADVWELDTNQIKYENKVGSGSFGDLYRGTYCSQDVAIKVLKPERISTDMLKEFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSLYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQSQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSCLTPLQAAVGVVQKGLRPTIPKTAYPRLSELLQRCWQQDPTLRPDFSEIIEILQHIAKEVNDHKDKSSHGFLSALRRVHH* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01096 572 PRINTS Tyrosine kinase catalytic domain signature 453 463 IPR001245 GO:0004672|GO:0006468
Lapu2g01096 572 PRINTS Tyrosine kinase catalytic domain signature 370 383 IPR001245 GO:0004672|GO:0006468
Lapu2g01096 572 PRINTS Tyrosine kinase catalytic domain signature 407 425 IPR001245 GO:0004672|GO:0006468
Lapu2g01096 572 PRINTS Tyrosine kinase catalytic domain signature 472 494 IPR001245 GO:0004672|GO:0006468
Lapu2g01096 572 PRINTS Tyrosine kinase catalytic domain signature 516 538 IPR001245 GO:0004672|GO:0006468
Lapu2g01096 572 CDD STKc_MAP3K-like 302 545 - -
Lapu2g01096 572 FunFam serine/threonine-protein kinase HT1 375 565 - -
Lapu2g01096 572 Pfam Protein tyrosine and serine/threonine kinase 297 545 IPR001245 GO:0004672|GO:0006468
Lapu2g01096 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Lapu2g01096 572 Gene3D Phosphorylase Kinase; domain 1 286 374 - -
Lapu2g01096 572 SMART serkin_6 296 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01096 572 Gene3D Transferase(Phosphotransferase) domain 1 375 566 - -
Lapu2g01096 572 ProSitePatterns Protein kinases ATP-binding region signature. 302 323 IPR017441 GO:0005524
Lapu2g01096 572 SUPERFAMILY Protein kinase-like (PK-like) 272 545 IPR011009 -
Lapu2g01096 572 CDD ACT_TyrKc 181 247 - -
Lapu2g01096 572 ProSiteProfiles Protein kinase domain profile. 296 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01096 572 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 170 553 - -
Lapu2g01096 572 FunFam Serine/threonine-protein kinase isoform 1 286 374 - -
Lapu2g01096 572 ProSiteProfiles ACT domain profile. 183 258 IPR002912 -
Lapu2g01096 572 SUPERFAMILY ACT-like 181 249 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01096 Lapu-Chr2 16266849 16276841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01096 2 571 MAP Kinase Kinase Kinase AT4G35780 69.739 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lapu2g01096 PK_Tyr_Ser-Thr 2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01096 - - gmx:100816767 1105.89