Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01085 ATGGCTTCCCTCCTTGTTGGTGTAGAGCCAAAACCAAACCAAGAAGTTGAAGAGAGAAACATAGACTATTCTCAGAGGGCGAATTGGCTGCGTGCAGCAGTGTTAGGAGCCAATGATGGGTTAGTCTCAGTTGCATCATTGATGATGGGTGTTGGAGCTGTCAAGGAGAACATCACAGCCATGATTCTTGCTGGTTTTGCAGGCTTAATTGCCGGGGCATGCAGCATGGCAATTGGAGAGTTTGTGTCTGTGTACACTCAATATGACATAGAAATAGCTCAAATTAAAAGAGACAGAGAAAACAATATTATTGGTGGAGTGAGTGAAGAAGCTCAAAGGGAGAAGTTGCCAAATCCATTTCAAGCTGCTCTAGCATCAGCTCTAGCATTTTCTGTGGGTGCAGTGGTGCCACTGCTAGCAGCTGCATTCATAAGGAACCACAAAATCAGGCTTGCTGTTGTTGTTGTTGTGGCTAGCCTCACATTGGTGCTATTTGGTGGGGTAGGAGCACTGCTTGGAAAAACTCCACTCACAAAGTCTTGCCTAAGAGTTCTCATTGGAGGTTGGATGGCTATGACTCTAACATTTGGCCTCACCAAGTTATTTGGCTTTGCTGGGATTTGA 624 0.4535 MASLLVGVEPKPNQEVEERNIDYSQRANWLRAAVLGANDGLVSVASLMMGVGAVKENITAMILAGFAGLIAGACSMAIGEFVSVYTQYDIEIAQIKRDRENNIIGGVSEEAQREKLPNPFQAALASALAFSVGAVVPLLAAAFIRNHKIRLAVVVVVASLTLVLFGGVGALLGKTPLTKSCLRVLIGGWMAMTLTFGLTKLFGFAGI* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01085 207 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 14 202 IPR008217 GO:0005384|GO:0030026
Lapu2g01085 207 Pfam VIT family 30 100 IPR008217 GO:0005384|GO:0030026
Lapu2g01085 207 Pfam VIT family 112 199 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01085 Lapu-Chr2 16135617 16136549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01085 14 207 Nodulin-like Gene Family AT3G43660 62.887 1.76e-87 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01085 K22736 - gmx:100817158 317.39