Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01069 ATGACCAAACCCAGAACTTTCTTTCGCAATCTCATCAAGCCCTTCAAATTCAGTTCCAGTAAAGAGGAACATAGCGAAGACGATATGCAGAACTTAGCTGCACAGGAGAACAAGGTCTTCGCTTACGAAACATTGGTTGCTGCTACGAACAAATTTCACATTCTTAACAAGCTCGGTGAGGGAGGATTCGGACCCGTCTTTAAGGGGAAACTGAGTGACGGGAGAGATATTGCAGTGAAGAAGTTATCGCATAGATCGAATCAAGGGAAGACGCAGTTCATTAACGAGGCCAAGTTGTTGGGTCGTGTGCAGCACCGAAATGTGGTGAATCTGATCGGTTACTGCGCCCATGCCTCCGAGAGGCTTCTTGTTTATGAGTATGTCCCTCGCAAGAGCCTTGACAAGCTTCTCTTCAAACCAGGGAAGAGAGAAGAGCTAAACTGGAAACGTAGATTTGACATAATCAGTGGGGTGGGAAGGGGTTTGCTTTATCTTCACGAAGACTCTCATAACTGCATAATCCATCGTGACATAAAGGCCAGTAACATATTACTGGATGAAAAATGGGGGCCTAAGATAGCAGATTTTGGTCTGGCGCGACTCTTCCCCGAAGACCAAACCCATGTCAACACACGTGTGGCTGGAACCAACGGGTATTTGGCTCCAGAGTATTTAATGTATGGCCATTTATCTGTGAAAGCAGACGTATTTAGCTATGGGGTTTTGATGTTGGAATTGGTCAGTGGGAAGAGAAATACATCCCTTGATGTTGACGGGAGTGCCCAGAATCTCCTCGACGGGGCATACAGGCTATACAAGAGAGGAAGGGCCCTGGAAATGGTGGACCCTGCATTGGGGTCTTCAGTGGTAAATGAACAAGTAGAAATGTGCATTAAACTGGGTCTGTTGTGCACTCAAGGTGACCCAGACCTCCGTCCAACCATGGGACGTGTCGTGGTGATGCTGTCAAGGAAAACAAACCACATGGAAGAACCAACAAGACCAGGCATGCCTGGTTCCAGATACAGAAGAGTCCCTCGCAGACCCTCTGCAATGTTTTCTTCTGGGGTTGATGATGACTCCAATTCACACACTTGTGATTCAAGCACTAACAACAATGCTACTTCTGCAACATCATCATCAACAACACCAAGCTCCACTGCAGAAGTAGATCCCAGAGGGAAACGACCAATTCAAGGTTAG 1203 0.4688 MTKPRTFFRNLIKPFKFSSSKEEHSEDDMQNLAAQENKVFAYETLVAATNKFHILNKLGEGGFGPVFKGKLSDGRDIAVKKLSHRSNQGKTQFINEAKLLGRVQHRNVVNLIGYCAHASERLLVYEYVPRKSLDKLLFKPGKREELNWKRRFDIISGVGRGLLYLHEDSHNCIIHRDIKASNILLDEKWGPKIADFGLARLFPEDQTHVNTRVAGTNGYLAPEYLMYGHLSVKADVFSYGVLMLELVSGKRNTSLDVDGSAQNLLDGAYRLYKRGRALEMVDPALGSSVVNEQVEMCIKLGLLCTQGDPDLRPTMGRVVVMLSRKTNHMEEPTRPGMPGSRYRRVPRRPSAMFSSGVDDDSNSHTCDSSTNNNATSATSSSTTPSSTAEVDPRGKRPIQG* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01069 400 Pfam Protein kinase domain 52 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01069 400 SUPERFAMILY Protein kinase-like (PK-like) 37 339 IPR011009 -
Lapu2g01069 400 FunFam Cysteine-rich receptor-like protein kinase 2 128 330 - -
Lapu2g01069 400 ProSiteProfiles Protein kinase domain profile. 52 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01069 400 SMART serkin_6 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01069 400 Gene3D Transferase(Phosphotransferase) domain 1 128 335 - -
Lapu2g01069 400 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 21 379 - -
Lapu2g01069 400 MobiDBLite consensus disorder prediction 324 400 - -
Lapu2g01069 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Lapu2g01069 400 CDD STKc_IRAK 58 324 - -
Lapu2g01069 400 Gene3D Phosphorylase Kinase; domain 1 14 127 - -
Lapu2g01069 400 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Lapu2g01069 400 MobiDBLite consensus disorder prediction 355 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01069 Lapu-Chr2 11287935 11293484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01069 40 337 Receptor kinase-like Gene Family AT4G11530 51.667 3.06e-111 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu2g01069 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01069 - - gmx:100811523 618.616