Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01061 ATGTTGGCTTCCACAGTCCTCCCTTCATCGAAGCTCCACCCTTCGCATTTCGTTCCACGCATCACCGTCGCAGGAACTCATCCCAGAAACACAGTCGCAATCTTTTCCAAATCCACCTTCAAACTCGCTTTCGTTGCCAGGGCCGCCCATGACGCACGTGACGGCGCTGTTGACGCAACCTCTCCGCCGGGTGTTGATGCATTAACAAGTACCTCTTCTGGCCTCGGGGAGGGTTATGTGGCCTTGTTTGTTCGTATGTTAGGCCTTGATCGTGATCCTCTGGATAGAGAACAAGCTATAATTGCCCTTTGGAAATATTCACTTGGTGGAAAGAAGTGTATAGACACTATAATGCAGTTTCCTGGTTGTATTAATCTCGTTGTGAATCTCCTCAGATCAGAGTCTAGTTCAGCATGCGAGGCAGCTGCAGGCCTTCTGCGATCACTATCTTCAGTCAATCGATATAGAAATTCTGTAGCTGACAGTGGAGCAATAGAAGAGATAAACAGATTGCTCAGGCGATCTTCCTTGACTCCTGAGGTAAAGGAGCAGAGTTTGACTATACTGTGGAATTTAACTGTTGATGAGAAGCTCTGGATTAAAATTCCAAAGGCTGAGATTCTGCCTGTAGTTATTAAGTACCTTGAAGATGAGGATATTAAAGTGAAGGAGGCTGCAGGGGGCATTTTGGCAAATTTAGCACTGAGCCGTGTTAACCACAACATCATGGTTGAAGCGGGTGTTATACCAAAATTGGCAAAGTTCTTAACATCTAATCTGGAAGGATCTAAAGTTATTAGGAAGGAAGCAAGGAATGCATTGCTAGAACTTTTTAAGGATAAGGATTATAGAATTCTTGTGATGGAGGAAGGTCTGGTTCCTGTGCCATTAATTGGTGCTGCGGCCTTTAAGTCATTCACCCGTAGCTTACATTTGTGGCCCACATTACCTGATGGCACAGAAATTGAAAGGACTTCTAGACAGCCATCCAAATATGGAGCTTCAGAATTACTTCTGGGATTGAATATTGATGACAAGAATGCTAACTTAGAGGAAGCAAAGGTCAGTGCAATTGTTGGACGAACCCGACAACAATTCCTTGCTCGTCTTGGGGCTTTAGAAATTGAAGAAAAGACTATACCTCATTCTGATTGCTCAAATGATCCGAGGATTACACTTTTACCTTGGATGGATGGTGTTGCTCGTTTAGCACTTATATTAGAACTGGAAGATAAGTTTGCAACAATAAAGGCTGCAGAATTAATTGCCACTGCATGTGTCAATGAACATATGCGTATTGCATTCAGGGAGGCTGGAGTAATTAAGCATTTAATAAGGCTTTTGAACTGTGATGACGATGCAGTCCAGTTGGCGGTAACACAAGCTTTGGAAAGGCTGTCTGTTAGCAATATTGTTTGCCGGGTAATTGAAGCTGAAGGGGCTTTAGGTCCTTTAGTTAGTATTTTGAAATGCTCAGGGATAGCTGGAACTATTGTGGAAAAGTCTTTGAGTACACTAGCTCGGATATTTCACCTCAATAAACAAATGCAATTGAAGTTTTATGATCGACCAGTTAATGGATCTGAAAAGGCATTTGGTGGAGCAAAGAGTGAATGTGTTTCAACCGAGTTTAGTAGCACTGAACAAACTGTATCAAAGACATACTCAAGGAATGATATACTTGATCCCGTTTTCATTGCACACCTTGTTGAGATTCTGAAGTCCTCTCCTCCCACTTTACAAGAAAAAGCTGCATCTGTGCTTGAGTTTGTGGCATTGAATGACCCAACTCTGGCCTCAATTTTATCTTTAGATATCGAGTCTGGTCTCAATTCTGCTTTTCAGCAAAAGATTTTGAAAATTTCAGCGGACATGGAATCTGATGCAGAAGATCAGTTTTATGAAGCATATGCTATTGAATTTGAAGAAGCCGGTCTGGCAATATCTGCAGCCTCGCGGTTTTTGACAACACTACTCAATTGCGAGCAGTTCCGCGACAAAATAAATGCCCCCCATTTCATTGATTTGCTTCGCGGAATCCTCAGGTCCAGTATTCCTCTCCACCACAAAGATTGGGTAGCTGCTTGCCTAGTTAAACTAAGTTCTCTCTCTGGCTCCATCGCCAGTCTCTATCCAATCAATGTGGAAGTTACACTTTATGAGACCATCCCAAGACTCGTTGAACAGATTAAAACTTCATTCTCCCCAGAAGCTCAAGAAACTGCCGTTGTAGAACTTAATAGAATAATATCTGAAGGAGTGGTAGATTCGACAGAAGAAGCTATTATTTCTGAGGGGGCAATAAGCTCATTGGTGAATCTGGTTGAAGAAGGTAGTGAAAGGGCTGTTGAAGCAAGCTTGGCAATAGTGTATAATCTGAGTATGAACAATGAGAACCATTCAGCACTTGTGGGTGCTGGAGCCGTGCAGGTCTTAAAAAGAATTGTTCTATCAAACAGACCACACTGGGAACGGGCACTTCTTTTACTCAGGATTTTGCAACCGTGA 2508 0.427 MLASTVLPSSKLHPSHFVPRITVAGTHPRNTVAIFSKSTFKLAFVARAAHDARDGAVDATSPPGVDALTSTSSGLGEGYVALFVRMLGLDRDPLDREQAIIALWKYSLGGKKCIDTIMQFPGCINLVVNLLRSESSSACEAAAGLLRSLSSVNRYRNSVADSGAIEEINRLLRRSSLTPEVKEQSLTILWNLTVDEKLWIKIPKAEILPVVIKYLEDEDIKVKEAAGGILANLALSRVNHNIMVEAGVIPKLAKFLTSNLEGSKVIRKEARNALLELFKDKDYRILVMEEGLVPVPLIGAAAFKSFTRSLHLWPTLPDGTEIERTSRQPSKYGASELLLGLNIDDKNANLEEAKVSAIVGRTRQQFLARLGALEIEEKTIPHSDCSNDPRITLLPWMDGVARLALILELEDKFATIKAAELIATACVNEHMRIAFREAGVIKHLIRLLNCDDDAVQLAVTQALERLSVSNIVCRVIEAEGALGPLVSILKCSGIAGTIVEKSLSTLARIFHLNKQMQLKFYDRPVNGSEKAFGGAKSECVSTEFSSTEQTVSKTYSRNDILDPVFIAHLVEILKSSPPTLQEKAASVLEFVALNDPTLASILSLDIESGLNSAFQQKILKISADMESDAEDQFYEAYAIEFEEAGLAISAASRFLTTLLNCEQFRDKINAPHFIDLLRGILRSSIPLHHKDWVAACLVKLSSLSGSIASLYPINVEVTLYETIPRLVEQIKTSFSPEAQETAVVELNRIISEGVVDSTEEAIISEGAISSLVNLVEEGSERAVEASLAIVYNLSMNNENHSALVGAGAVQVLKRIVLSNRPHWERALLLLRILQP* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01061 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 206 248 IPR000225 GO:0005515
Lapu2g01061 835 SMART arm_5 428 468 IPR000225 GO:0005515
Lapu2g01061 835 SMART arm_5 755 795 IPR000225 GO:0005515
Lapu2g01061 835 SMART arm_5 553 593 IPR000225 GO:0005515
Lapu2g01061 835 SMART arm_5 195 235 IPR000225 GO:0005515
Lapu2g01061 835 SMART arm_5 152 194 IPR000225 GO:0005515
Lapu2g01061 835 SMART arm_5 236 279 IPR000225 GO:0005515
Lapu2g01061 835 SMART arm_5 110 151 IPR000225 GO:0005515
Lapu2g01061 835 Gene3D - 642 833 IPR011989 -
Lapu2g01061 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 766 808 IPR000225 GO:0005515
Lapu2g01061 835 SUPERFAMILY ARM repeat 77 815 IPR016024 -
Lapu2g01061 835 ProSiteProfiles HEAT repeat profile. 207 245 IPR021133 -
Lapu2g01061 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 122 164 IPR000225 GO:0005515
Lapu2g01061 835 Pfam Armadillo/beta-catenin-like repeat 428 467 IPR000225 GO:0005515
Lapu2g01061 835 Gene3D - 385 616 IPR011989 -
Lapu2g01061 835 Gene3D - 57 301 IPR011989 -
Lapu2g01061 835 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 44 834 - -
Lapu2g01061 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 163 196 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01061 Lapu-Chr2 10624686 10646161 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01061 78 298 U-box Gene Family AT2G23140 29.464 9.89e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01061 - - gmx:100793128 1331.24