Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01023 ATGGGAGGCTTATTACACTTTTTCGAATTCAATCAGGGGAGGATGGCCAAGAAAGTCCTTGCTCGGAAGAGACATCATGGTGGCATGGAAGCTCCTCGAAATAGTCTAGATCTGCAAGTACAAACACCTCATAACTACTGTCCAGAAGGAGAATTATCAGGCAATTATCAAGTAGAAGAAGAGGGCAGGCCTGAGAATAATCGTTATTCAAATGTGGGTTCGATGGAAAAACTGATTAATGAAGAGCTATCCAAACAATCAAGCACCAGGCAAAATGCGCCAAGCCTTGTTGCAAGGTTGATGGGAATAGATTGGATGCCATTAGACACTAAATATGTTGTCCCATCAGATAAAAGAAGAAGTGAAAACTTGGGGAAGAAATCTTCAGAGAAAGGAGTGAGTCGAAGGGGTTCAGTTAGTTGGGGTTCTTCCAACTTTAATTCTTCGAGCCATATGGATTTTGAGTCATTATATGAAGACATGGATGTTGTTGATGATGATGATGGATGGAACAAGAGTTTTGGAGAACCAAGGCGGCGGGATCATCCTCAGGAAGAGGAACTCCGGAAATTCAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCTCGAGTGTTCGAAGGTTGCTGAAATTGGCAGTGTTCCTAGACGATTGCTTGCTCAAGAAAACCTGAACAAGGAAAAGGTGATGCATAATGATTTAGTTTTACAAATAGCAGCAGCAGGGAAACTTGCAGATCTTGACTGTCACTCATTCAAAACACCACCACCTGAAAGTTATGGTTCAGAATATCATGGTAATATGATGGAGTTAGTCCCAGCTACACAAAGGAAAACCTTTCCTCCAAGGAGCAGAACACTAAGTAGAGACTTTGAGGAGTCCTTATTAATGAAATCTTGCAACAGATTAGACACTTCTTCTTCTCCCACTAGGATAGTTATCTTGAAGCCTGGTCCTGATAGCATTTGCAACCATGAAGAGAATTGGACCATTTCAACAGGAACTTTACAAGGGAGAAATAGTATAGAAGATTTTCTTGAAGAGGTGAAAGAGCGTTTGAAATGTGAACTGCAAGGGAAAATTGTCAAAAAGGTTTCTGTGGTTCGAGGAAGTGGAATTGAAACACCTTACAAGGAAAAACCATGCGATCCTAAACTAATAGCCCAACATATAGTAAAGCAAGTCAGGGAAAGTGCGACTAGAGATGCTGACACAAATTTACTCCACTCAGAATCAACAGGGTCGTTCAAAAGTGAAATGCAATTCAATGGACCAACTTCCCCAGAAATTATCAGCAGAGATACCCGGAAGTTCTTATCAGATAGGCTAAGAAATGTTGTGAGAAGTGAAGCATATGCTGACGTTCCTGAGGGAAAATCAAGGTCAATAGCATTAGACAGCCATAAAGCTGGACTAAAGCAAGTGGAGGACATTATAAAGACCACAAGTAACTGGGAAATTTCCAAAGAGGACACAGAAATACAAACAGGTTCTTTCAGGCATGAACTGGGTGAAAATATATTCACGCACAAGGAGTTGTCCCCAAGGAATCTTGTAAGATCTTTGTCTGCTCCTGTATCACGATCAGGAACATCATTTGGGAAGCTTCTTCTGGAGGACCGCCACATTTTAACTGGGGCTCAGATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGTCCGTTGATGTCAAGAAACGGAAAAAGGAGAGATTTAATATTAAAGAACGAGTTTCCAATTTTAGATATAATCTTGCTTTAAGAGGGAGGCTTTTTGGCAGAAGGGTCCAATCAATGGCGGAATCACGTGGCAATGAGTATGGTCCCATGGTGAGAGATGTCACGAGTGGACCAACAGTTCTCATGAACTGCGGTGAGCGGCATGAGAACTCCACTGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCAGCATTCATGAAGACTTTTGGAGGCGGACTGAATATTTAAGTCCAACATCAACTCCTGATGTGTCTTCAAGAGATGATAATGTTGTGCCCCAGGTTTTCAGGGATATCAGCTCCGGTTTGAATGAGCTAAGGAGGCAACTCAATCAACTTGAATCTGATGGTCCTGAGGACTTCACTGTGAAACAGGAGACCGCTGAGTCTGACTTGGACCAATTAGAAGATCCAGCAGAATCTTACATAAGAGATCTACTTGTTGCTTCTGGACTGTACTTTGGTTCATGGGATAAGTCTTTATTAAGAGGGGACACCTTTGCAAAGCCTATTGGAAACTCAGTTTATGAAGAAGTGGAAGAATCTCGCAAGAAATCGGTCAAGGAAAATGATGAAAGCAGTATCAAGGATCAGAATGAGAATAAGCTAGACCACAAGGTTTTGCTTGATTTGTTAAATGAGGCACTTTCAGTTGTTCTGGGACCTCCATTGACATTGTCTAGATTCAGAAGGAAATTAAGTAACTCTTCCATGTTGCCACCTTCTGGAAAGGAACTATTGAACTTAGTGTGGGACATTATCCGTGTTTCTTTACATCCTCCATCTGACATATCTACTTATTCACTTGATACTTTGGTGGCTCAACATCTAGGATCCATCCCTTGGTCTGAATTAATAAATGATGAGATCAATATTTTGGAAAGAGATATAGAATATCTAATAACTGATGATCTGGTTGAAGAACTCACAAAGGATATATGTTCTAAGATGAAGTGA 2697 0.4123 MGGLLHFFEFNQGRMAKKVLARKRHHGGMEAPRNSLDLQVQTPHNYCPEGELSGNYQVEEEGRPENNRYSNVGSMEKLINEELSKQSSTRQNAPSLVARLMGIDWMPLDTKYVVPSDKRRSENLGKKSSEKGVSRRGSVSWGSSNFNSSSHMDFESLYEDMDVVDDDDGWNKSFGEPRRRDHPQEEELRKFKKEFEAYQAARFLECSKVAEIGSVPRRLLAQENLNKEKVMHNDLVLQIAAAGKLADLDCHSFKTPPPESYGSEYHGNMMELVPATQRKTFPPRSRTLSRDFEESLLMKSCNRLDTSSSPTRIVILKPGPDSICNHEENWTISTGTLQGRNSIEDFLEEVKERLKCELQGKIVKKVSVVRGSGIETPYKEKPCDPKLIAQHIVKQVRESATRDADTNLLHSESTGSFKSEMQFNGPTSPEIISRDTRKFLSDRLRNVVRSEAYADVPEGKSRSIALDSHKAGLKQVEDIIKTTSNWEISKEDTEIQTGSFRHELGENIFTHKELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAQIRRKLEAVETMSVDVKKRKKERFNIKERVSNFRYNLALRGRLFGRRVQSMAESRGNEYGPMVRDVTSGPTVLMNCGERHENSTEVPPSPASVCSSIHEDFWRRTEYLSPTSTPDVSSRDDNVVPQVFRDISSGLNELRRQLNQLESDGPEDFTVKQETAESDLDQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVYEEVEESRKKSVKENDESSIKDQNENKLDHKVLLDLLNEALSVVLGPPLTLSRFRRKLSNSSMLPPSGKELLNLVWDIIRVSLHPPSDISTYSLDTLVAQHLGSIPWSELINDEINILERDIEYLITDDLVEELTKDICSKMK* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01023 898 Coils Coil 676 696 - -
Lapu2g01023 898 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 894 - -
Lapu2g01023 898 Pfam Domain of unknown function (DUF4378) 721 888 IPR025486 -
Lapu2g01023 898 MobiDBLite consensus disorder prediction 117 142 - -
Lapu2g01023 898 Pfam DUF761-associated sequence motif 89 107 IPR032795 -
Lapu2g01023 898 MobiDBLite consensus disorder prediction 117 133 - -
Lapu2g01023 898 MobiDBLite consensus disorder prediction 758 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01023 Lapu-Chr2 9641005 9647123 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01023 75 893 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 40.423 1.57e-153 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01023 - - gmx:100779720 1510.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01023 2 9641005 9647123 Lapu2g01023 2 9641005 9647123 ECH