Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01016 ATGAGTGGTAGTGCTGGTGGTGGATGCCCCTGCCCCAGGGGTACTAGTGATGGCTCCCTGGAGGATCTGCATGGAGATACGGTGGGGAACTTGAATCAGAATCCAGGGAAGCCTCCGAGGGACCATTCGGTTATGCGACATTTCAGCAGCTCATCTTGGTCTGCGGAACCGGTATTTGATGGACATGGTGGTGTTGACGCAGCATCATTTACGAGAAAGAACATCCTCGAGTTTATAGTTAAAGATGCCCATTTCCCATCTGGCATTAAGAAAGCAATTAAGAGTGCATTTGTGAAGGTTGATCTTGCTTTTCGAGATGCCAGTGCTCTTGATAGCTCTTCAGGCACCACCGCTCTGATAGCCCTTATGTTGGGAAGTTCCATGCTGATTGCCAATGCAGGAGATTCTCGTGCTGTATTGGGCAAACGGGGCAGAGCCGTTGAACTTTCCAAAGACCATAAACCAAATTGCACTTCTGAAAAATTAAGAATTGAAAAACTGGGTGGTGTCATCTATGATGGATACCTCAATGGCCAACTATCAGTGGCTCGTGCTCTTGGAGATTGGCACATAAAAGGCACTAAAGGTTCTAAGAGTCCTTTAAGCTCAGAGCCGGAGCTGGAGGAGATTGTGCTGACGGAAGAGGACGAGTTTTTGATAATGGGCTGTGATGGATTGTGGGATGTGATGAGCAGCCAGTGTGCTGTGACAATGGCGAGGAGGGAGCTCATGCAGCATAATGATCCTAACAAATGTGCAAAAGTACTTGTTACTGAGGCCCTCCAACGCAACACATGTGACAACCTCACAGTTGTGATCGTGTGTTTCTCCAAAGATCCACCTCCTAAAATTGAAATTCCTAGATCATATAGGAGGAGGAGTATTTCTGCTGAGGGCCTTGATCTTCTCAAGGGTGTCTTGAATGGTAGATGA 933 0.4727 MSGSAGGGCPCPRGTSDGSLEDLHGDTVGNLNQNPGKPPRDHSVMRHFSSSSWSAEPVFDGHGGVDAASFTRKNILEFIVKDAHFPSGIKKAIKSAFVKVDLAFRDASALDSSSGTTALIALMLGSSMLIANAGDSRAVLGKRGRAVELSKDHKPNCTSEKLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGTKGSKSPLSSEPELEEIVLTEEDEFLIMGCDGLWDVMSSQCAVTMARRELMQHNDPNKCAKVLVTEALQRNTCDNLTVVIVCFSKDPPPKIEIPRSYRRRSISAEGLDLLKGVLNGR* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01016 310 MobiDBLite consensus disorder prediction 1 47 - -
Lapu2g01016 310 CDD PP2Cc 58 276 IPR001932 -
Lapu2g01016 310 PANTHER PROTEIN PHOSPHATASE 2C 57 274 IPR015655 GO:0004722|GO:0006470
Lapu2g01016 310 Pfam Protein phosphatase 2C 49 268 IPR001932 -
Lapu2g01016 310 SMART PP2C_4 31 274 IPR001932 -
Lapu2g01016 310 Gene3D - 38 280 IPR036457 -
Lapu2g01016 310 ProSiteProfiles PPM-type phosphatase domain profile. 28 276 IPR001932 -
Lapu2g01016 310 SMART PP2C_SIG_2 40 276 IPR001932 -
Lapu2g01016 310 SUPERFAMILY PP2C-like 50 277 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01016 Lapu-Chr2 9581454 9583605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01016 44 308 PP2C-type Phosphatase Gene Family AT3G51470 78.113 1.45e-155 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01016 K14803 - gmx:100786416 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01016 2 9581454 9583605 Lapu2g01016 2 9581454 9583605 ECH