Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01014 ATGAAAATTTCTGTTTTAAGCTCTCCGTTTTCCCTGTTTCTTCTCCTTTTTCTCTCCTTCTCTTTCTTCTGCTTTTCCACCTCACAATCCCAACTCTCCCTTGTCTCTTCTCCACCCTCAGTTAAACCGGCCACCGCACTCGTCGCCGCCCTCGATGGCACCATGTATTTGGTGGATAGTGATTCTGGAAGGGTCATTTGGTCTTTTTCAACTGGATCTCCAATCTACTATTCCCATCATGCTCCCACCAATAACCCTAACCACAACTTCACCGGCTTCGTTGAATGTGGAGATGATTGGGAATTAATCGTCCACGACCCTCACTTGGGTGAAATGAAGTTATATTTAGGACCTTTTTCATGCCTGCAGAGACTATCGAAATCAATTGAAGAGTATGTTGCTTCTACCCCTGTCAAGACAGAGGATGGAGCATCTGTATTTGGTCACAAAAGAACCACTGTGTATCTGGTTGATGCTAAAACTGGAGGGCTTTTTCGAAGCTTCTCTGAACATGATCATGCTTATAAAGTGGTGTCGAGTTATGATGACCGGCAGCATGTTGCTAGTACGAATAATAATGAGCTTGTTGATCCTGCACAGCTGAATCCACCTGAGTTCTTGCTTGAGATAGCTAGGACGGATTATACTTTGCAATCCGTTGTTCCTGGTTCTGGAATAGTTTTGTGGACTGTGAAAGTGGCTGAATTTAAGGCTGCATTGGTTTGCCCACATATTCAAAATCCTTGTGAAGGGAATGTTTTGGACGGTGGTTTAGATTTTGCTATGCCCTATGCATGTTGCGACAAGAAACTGAATGAAGTATACCGCCAACGAAAGAAATTTTTTATAGAACGTGCTCACCCTGAGGTTCATGAAGAGGTTTATATGCTTCCATTTCGTACTCCGGAGCTCATGCTTCCATCACAACCTGCTACTGATAAATCTGTTCTAGGCCAGGATGGAAATACGATGCTATCTTTGCCTATGGGAAATTCTTTGCCTTTGCAAAAAAAAATTGGCTACTATGAGAGCAATGATAATGTACCTATGCTCCCTCGGTCTCTCATGGAGATCACTACAGAGGAAGTTGATCCAGGCAGGGTGAATAAATGGTCAACAACATTACCTCTTGTATTATTTACTATCTCTCTTGGTTTTTTTATTATCTATCACTCTCTAGTCTTTACAAATAAAGACCGAAACAGGGAGATAAATTCAAAAAGTTCACCTCCTAAGAAGAAGAAAGCTCGCAAGTCAATAAAGAACAACATCATTGCTGTCACACAGAATAAGCAATCGTTATTGGTCCAGGAGGAGGACACATTCACGCTTAATGAAACAAACTCTAGTACACAGGTGCAAGTTGATGGACGTAGGATTGGTAAACTATTTGTATCAAATACAGAGATTGCTAAGGGAAGCAATGGTACTGTTGTCCTTGAGGGGACATACGAAGGTCGGACAGTTGCTGTCAAACGTCTTGTTCAAAGTCATCATGATGTAGCCCATAAAGAAATCCAAAATCTCATTGCATCTGACAGACATCCAAATATTGTTCGATGGTATGGGGTGGAATGCGATCATGATTTTGTTTACCTTGCTCTGGAACGCTGTACATGCAACTTGGACGATTTGATTCATTTGTACTCTGATATATCAGAAAATCCAGCAGTTAGAACTTCTCAAATACAGACAGAGAAGAATGATATGCACTATCTTTGGAAAACAAATGGTTTTCCATCACCTCTGTTACTGAAACTGATGAGGGATGTAGTTTCTGGGCTTGCTCATTTGCATGAACTAGGGATAATCCATCGGGATTTGAAACCTCAAAATGTTTTGATAATAAAAGAAAGATCGTTAGTTGCAAAGCTTTCTGACATGGGAATTAGCAAACGCCTTCTAGAAGATATGTCTTCTCTAGGTGAAAGTGTTACAGCACCGGAGCAACTTGTTCAAGGGCGTCAAACACGAGCTGTGGATTTATTTAGTTTAGGTTGTGTCCTCTTTTTTTGCATGACTGCAGGAAGACATCCATTTGGAGAGCGGCTTGAGCGTGATGTCAATATTGTGAAAAATCAAAAGGATCTTTTCTTAGTGGAGTGTATGCCTGAAGCTGACGATCTTATTTCTTGTTTGTTAAACCCTAATCCTGATCTTAGGCCAATGGCGATTGAAGTGTTGCAACATCCTCTTTTTTGGAGCTCTGAGATGAGACTTTCATTTTTTCGTGATGTAAGTGACAGGGTGGAACTTGAAGATAGAGAATCCGATTCTGATCTTTTGAAGGTATTGGAAAGCATTGCTTCACTGGCTCTAGGTGCAAAATGGGATGAGAAGCTAGATCCTGATTTCATCACTAACATTGGTCGTTACCGGAGATATAAATTTGACAGTGTTCGAGACTTGTTGAGGGTCATGAGAAATAAGCTAAATCATTACAGGGAACTGCCTCAAGAAATCCAGGAACTGATAGGACCTGTTCCGGAAGGATTCAATGACTACTTTGCAAGTCGATTTCCAAGGCTCTTGATTGAAGTGTACAAAGTTATATACAGAAATTGCAAGAACGATGAATGTTTTCAGAGATATTTTAGACACATTAACTAG 2610 0.4084 MKISVLSSPFSLFLLLFLSFSFFCFSTSQSQLSLVSSPPSVKPATALVAALDGTMYLVDSDSGRVIWSFSTGSPIYYSHHAPTNNPNHNFTGFVECGDDWELIVHDPHLGEMKLYLGPFSCLQRLSKSIEEYVASTPVKTEDGASVFGHKRTTVYLVDAKTGGLFRSFSEHDHAYKVVSSYDDRQHVASTNNNELVDPAQLNPPEFLLEIARTDYTLQSVVPGSGIVLWTVKVAEFKAALVCPHIQNPCEGNVLDGGLDFAMPYACCDKKLNEVYRQRKKFFIERAHPEVHEEVYMLPFRTPELMLPSQPATDKSVLGQDGNTMLSLPMGNSLPLQKKIGYYESNDNVPMLPRSLMEITTEEVDPGRVNKWSTTLPLVLFTISLGFFIIYHSLVFTNKDRNREINSKSSPPKKKKARKSIKNNIIAVTQNKQSLLVQEEDTFTLNETNSSTQVQVDGRRIGKLFVSNTEIAKGSNGTVVLEGTYEGRTVAVKRLVQSHHDVAHKEIQNLIASDRHPNIVRWYGVECDHDFVYLALERCTCNLDDLIHLYSDISENPAVRTSQIQTEKNDMHYLWKTNGFPSPLLLKLMRDVVSGLAHLHELGIIHRDLKPQNVLIIKERSLVAKLSDMGISKRLLEDMSSLGESVTAPEQLVQGRQTRAVDLFSLGCVLFFCMTAGRHPFGERLERDVNIVKNQKDLFLVECMPEADDLISCLLNPNPDLRPMAIEVLQHPLFWSSEMRLSFFRDVSDRVELEDRESDSDLLKVLESIASLALGAKWDEKLDPDFITNIGRYRRYKFDSVRDLLRVMRNKLNHYRELPQEIQELIGPVPEGFNDYFASRFPRLLIEVYKVIYRNCKNDECFQRYFRHIN* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01014 869 SMART PGNneu 798 852 - -
Lapu2g01014 869 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 33 211 IPR011047 -
Lapu2g01014 869 ProSiteProfiles Protein kinase domain profile. 464 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01014 869 Pfam Protein kinase domain 466 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01014 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
Lapu2g01014 869 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 456 536 - -
Lapu2g01014 869 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 737 869 - -
Lapu2g01014 869 Gene3D Transferase(Phosphotransferase) domain 1 562 735 - -
Lapu2g01014 869 Gene3D Phosphorylase Kinase; domain 1 449 536 - -
Lapu2g01014 869 Gene3D - 24 256 IPR015943 GO:0005515
Lapu2g01014 869 PANTHER IRE1-RELATED 124 867 IPR045133 GO:0004521|GO:0004674|GO:0030968
Lapu2g01014 869 SUPERFAMILY Protein kinase-like (PK-like) 458 745 IPR011009 -
Lapu2g01014 869 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 565 735 - -
Lapu2g01014 869 ProSiteProfiles KEN domain profile. 736 867 IPR010513 GO:0004540|GO:0006397
Lapu2g01014 869 SMART serkin_6 464 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g01014 869 SMART ire1_9 39 70 IPR018391 -
Lapu2g01014 869 SMART ire1_9 137 169 IPR018391 -
Lapu2g01014 869 CDD RNase_Ire1 737 865 - -
Lapu2g01014 869 Pfam Ribonuclease 2-5A 739 865 IPR010513 GO:0004540|GO:0006397
Lapu2g01014 869 Gene3D KEN domain 736 869 IPR038357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01014 Lapu-Chr2 9559320 9565993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01014 488 732 MAP Kinase Kinase Kinase AT3G06030 27.344 8.52e-18 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Lapu2g01014 Pkinase 1.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01014 K08852 - gmx:102661527 1207.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01014 2 9559320 9565993 Lapu2g01014 2 9559320 9565993 ECH