Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01005 ATGGCGCGGCCGAGTGACGAGGATTCTCCACCGTTAACTTCAACCGCCGGGGGCAGCAATTCACAGATTCCGGCAGCTATGGAAATGATTGATGATATACTGCCACAGCCTTCAGAGGGATCAACGAATAATTCCTTTCTGGCAACTGTGGTCGAAGTTGATGGTAGTGAGGATATTTTAGAGGAATTATTACCATATGCTGCAGAGGATGAGATTTTTATCTTAGCAGCGACTGGAAAAGTATCATACATTGAACTTGCCAATCCACATGAAGATCCCGTACCAAACACTGTTTTACGAGGAAATTTCGAGATTTCGTCAATGGAGGGCAATATTGTTTGGCCAAAAAACCATGAAAAGAACAAAAAGAGTGAGGTGACTGTTTTGGTGGTTGGAAATGATGGTCGGATTCGAGGAGGACCTGTGCGAACCTTAATTGCCAAATCTGCTATTAAGGTGATGGTTAGCACAACGAATAAAAATGTCATACAGAACATGGCGTGTAAGGAATACTTGAAGGAAAATGAGGTTTCAATATTCCAATTCCAGGACCAAGCTAAACGTATGGAAGAAGTAATGTATGAGATCTATAAGGCTACATTGAAGGAGCTGAATGAAGCACATTAA 627 0.4195 MARPSDEDSPPLTSTAGGSNSQIPAAMEMIDDILPQPSEGSTNNSFLATVVEVDGSEDILEELLPYAAEDEIFILAATGKVSYIELANPHEDPVPNTVLRGNFEISSMEGNIVWPKNHEKNKKSEVTVLVVGNDGRIRGGPVRTLIAKSAIKVMVSTTNKNVIQNMACKEYLKENEVSIFQFQDQAKRMEEVMYEIYKATLKELNEAH* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01005 208 Coils Coil 194 208 - -
Lapu2g01005 208 CDD DUF296 50 157 IPR005175 -
Lapu2g01005 208 MobiDBLite consensus disorder prediction 1 22 - -
Lapu2g01005 208 Gene3D - 48 183 - -
Lapu2g01005 208 MobiDBLite consensus disorder prediction 8 22 - -
Lapu2g01005 208 Pfam Plants and Prokaryotes Conserved (PCC) domain 50 157 IPR005175 -
Lapu2g01005 208 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 22 161 IPR039605 GO:0003680
Lapu2g01005 208 SUPERFAMILY AF0104/ALDC/Ptd012-like 46 162 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01005 38 157 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 26.190 2.50e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01005 - K03585 pvu:PHAVU_002G118500g 337.421