LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu2g00994	ATGATTCCCCTCCAATGCAACAACATGGGTGGTTACTCCGCCGCCATCACCGTCATCACCACCATCCTCCTCCTGTTCCCGGCGCCGACTTCCCAAGCTCAGATTCTCCGCACACAAACCCACGTTTTCGGTCCCTTCAACCAATCCTACTTCAACACATTCGCGGTGTTGCCCAGCGCCGCCATCAACCTGGAAGCTCTCCAAGTAACCCCAGACAGCACCGGCAACGTTTCCCTGACCAACCGCTCCGGAAGAATCTTCTTCAACACCCCTTTCACTCTCTGGGACGACGACGATAGCCTCGATGGAAAACTCGTCTCTTTCAACACTTCCTTTCTGATAAACGTCTACCGTCCCAAAAACGAAACTCCCGGCGAGGGCATCGCCTTCTTCATCTCGCCTTCTGCCTCCGTCCCTCCTCTCAACAGCTACGGCAAGTTTCTCGGTCTCACCAACTCCTCCACCGACGGCAACCGCACCAACCAAATCCTCGCCGTCGAACTTGACACCGTCAAGCAGGACTTCGACCCCGACGACAACCACATCGGCCTCGACGTTAACGGCGTCAGGTCCAACGTCACAGTGTCTCTCACTCCCTTGGGGTTCGAGATCGCGCCCAACGTCACGCGCTTCCACGTGCTGTGGGTGGAGTATGACGGTGACCGGAAGGTGATCGACGTGTACGTGGCGGTGCAGCCTGATAAGGACGCGCCCATAGTGGCGAAACCGGCTAAGCCGGTTTTGAGTTCAGCTCTCGATCTGAAGGAAGTGGTGAACAAGGTTTCTTACTTTGGGTTCTCTGCTTCGACCGGTGACAACGTTGAACTAAACTGCGTGTTGAGGTGGAACATTTCTATTGAAGTTTTTCCCGAAAAAAAAGGGGTTGGAAATGCGTTGAAGATTGGGTTGGGTGTTGGAGTGCCTCTGGTGGTTCTTCTTGTGGCGGGTGTTGTAGGGTGGATTTATTGGTTGAGGAGAAAGCACAGAGAAAGTGAGACTCAGATTTTGGGAACTCTCAAGAGTTTACCTGGAACTCCCAGAGAGTTTAGGTTTCAAGAATTGAAGAAAGCGACTAATAATTTCGATGGGAGGCATAAACTCGGGCAGGGTGGATACGGCGTCGTTTATAGAGGAACACTTCCGAAGGAGAAGTTGGAAGTAGCCGTTAAAATGTTCTCCAGGGATAAGATGAAAAGCGCCGATGATTTCTTGGCTGAACTCACCATCATCAATCGCCTTCGTCACAGAAACCTTGTTCGCTTACTCGGGTGGTGTCACAGAAACGGGGTGTTGCTGTTAGTGTACGATTACATGCCTAATGGCAGTTTGGACAACCACATTTTCTGTGAGGAAGGGAGCTGCACTACCCCACTAAGTTGGCCTTTTAGGTACAAGATCATTGCAGGGGTGGCTTCTGCATTGAACTACCTACACAACGAGTATGATCAGAAAGTGGTCCACAGAGACCTTAAGGCCAGCAACATCATGCTGGACTCAGACTTCAATGCTCGTTTAGGTGACTTCGGCTTGGCTCGTGCATTGGAGAATGATAAAACATCATATGCAGAGTTGGAAGGAGTCCATGGCACCATGGGGTACATTGCACCTGAGTGTTTCCACACGGGGAGGGCCACAAGGGAATCGGATGTTTATGGATTTGGAGCAGTGCTCCTTGAGGTGGTGTGTGGCCAAAGGCCATGGACCAAGAATGAGGGGTATGAGTGCTTGGTGGATTGGGTATGGCTCCTGCATCGTGAGCAAAGGATACTTGATGCAGTGGATCCAAGACTTGGGAATGATTGTGTGGCTGAAGAGGCAGAGAGGATTCTGAAATTAGGACTAGCATGCTCCCACCCCATTGCCAGTGAGAGACCAAAGATGCAAACAATTGTTCAGATCATATCTGGTTCAGTGCCTGTGCCTCATGTTCCACCTTTCAAGCCAGCTTTTGTGTGGCCAGCTATGGATCTATCAAGTCTTGCAAGTGAGCTCACACAGACCACAACAACCGAGTACACACCCATGAACAGTACCACACATTCTACGCATGTTGATTTCTCAGATAGCGGCTCTCTCGTCTAA	2082	0.5101	MIPLQCNNMGGYSAAITVITTILLLFPAPTSQAQILRTQTHVFGPFNQSYFNTFAVLPSAAINLEALQVTPDSTGNVSLTNRSGRIFFNTPFTLWDDDDSLDGKLVSFNTSFLINVYRPKNETPGEGIAFFISPSASVPPLNSYGKFLGLTNSSTDGNRTNQILAVELDTVKQDFDPDDNHIGLDVNGVRSNVTVSLTPLGFEIAPNVTRFHVLWVEYDGDRKVIDVYVAVQPDKDAPIVAKPAKPVLSSALDLKEVVNKVSYFGFSASTGDNVELNCVLRWNISIEVFPEKKGVGNALKIGLGVGVPLVVLLVAGVVGWIYWLRRKHRESETQILGTLKSLPGTPREFRFQELKKATNNFDGRHKLGQGGYGVVYRGTLPKEKLEVAVKMFSRDKMKSADDFLAELTIINRLRHRNLVRLLGWCHRNGVLLLVYDYMPNGSLDNHIFCEEGSCTTPLSWPFRYKIIAGVASALNYLHNEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARALENDKTSYAELEGVHGTMGYIAPECFHTGRATRESDVYGFGAVLLEVVCGQRPWTKNEGYECLVDWVWLLHREQRILDAVDPRLGNDCVAEEAERILKLGLACSHPIASERPKMQTIVQIISGSVPVPHVPPFKPAFVWPAMDLSSLASELTQTTTTEYTPMNSTTHSTHVDFSDSGSLV*	694

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu2g00994	693	FunFam	Putative L-type lectin-domain containing receptor kinase S.5	37	298	-	-
	Lapu2g00994	693	Pfam	Legume lectin domain	53	287	IPR001220	GO:0030246
	Lapu2g00994	693	FunFam	probable L-type lectin-domain containing receptor kinase S.5	346	437	-	-
	Lapu2g00994	693	ProSitePatterns	Legume lectins beta-chain signature.	164	170	IPR019825	-
	Lapu2g00994	693	Gene3D	Transferase(Phosphotransferase) domain 1	438	638	-	-
	Lapu2g00994	693	PANTHER	-	70	644	-	-
	Lapu2g00994	693	Pfam	Protein kinase domain	365	631	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu2g00994	693	CDD	lectin_legume_LecRK_Arcelin_ConA	51	283	IPR001220	GO:0030246
	Lapu2g00994	693	SUPERFAMILY	Concanavalin A-like lectins/glucanases	45	289	IPR013320	-
	Lapu2g00994	693	CDD	STKc_IRAK	367	634	-	-
	Lapu2g00994	693	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	485	497	IPR008271	GO:0004672\|GO:0006468
	Lapu2g00994	693	FunFam	probable L-type lectin-domain containing receptor kinase S.5	438	639	-	-
	Lapu2g00994	693	ProSiteProfiles	Protein kinase domain profile.	361	643	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu2g00994	693	MobiDBLite	consensus disorder prediction	671	693	-	-
	Lapu2g00994	693	SMART	serkin_6	361	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu2g00994	693	ProSitePatterns	Protein kinases ATP-binding region signature.	367	390	IPR017441	GO:0005524
	Lapu2g00994	693	SUPERFAMILY	Protein kinase-like (PK-like)	343	663	IPR011009	-
	Lapu2g00994	693	Gene3D	Phosphorylase Kinase; domain 1	346	437	-	-
	Lapu2g00994	693	Gene3D	-	38	297	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu2g00994	Lapu-Chr2	9261366	9264799	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu2g00994	58	646	Receptor kinase-like Gene Family	AT3G53810	39.968	4.55e-126	387

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Lapu2g00994		Pkinase	1.3e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu2g00994	-		-	gmx:100780014	1169.84