Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00984 ATGGCGACAGTAGGAGTTGGAGTGGGCGTGGGGGGTGACATATGGAAGGCCCATATGGCCATGGCCATGGTGCAGCTTTTCAATGGCGGCTACCATGTTATCACCAAAGTGGCCCTTAATGTTGGCATCAACCAATTAGTCTTCTGCGTATTCCGCGATCTCCTTGCGCTTTCCATCCTCGCTCCCCTTGCTTATATCCGTGAAAAACGCATTCGGCCACCCACTACTAAGAACCTCTTGGTGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGCTACACTAATCCATCTTATGCGGCTGCCATACAACCGGCCATTCCGGTATTTACCTTTATGTTGGCTGTAATGATGGGTACAGAAAGAGTAAACTTAGTCAGATATGATGGTCTGGCAAAAGTTGGAGGAACCATCATCTGTGTTTCTGGTGCCGTATTGATGGTTTTGTATCGTGGTCCAGCTTTGATAGGATATGCTGAAATTGATATTGTTACACAAAATGAAATAAGTGCCAAAGGTCAGCCAGAGCCATCTGGATGGCTAATTGGTAGTTTACAGGATATCGGGTTCGACCATTTTCATCTTGGGGTTCTGTGCTTGATAGGGAACTGCTTTTGTATGGCTGCGTTTTTAGCCATTCAGGCACCAGTATTAAAAAAATATCCCGCAAACATATCTGTCACAGCATTTTCATACTTCTTCGGAGCTTTACTGATGGTGATAGTGTCATTATTCATGAATAACGAGTCAACTGACTGGAGTTTGACGTCATCAGAAATACTTGCTGTTATTTATGCTGGAACTATTGCATCTGCCCTCAACTATGGACTCATTACATGGTGCAACAAAGTCTTGGGGCCAGCCATGGTTTCCCTTTACAATCCACTTCAACCTGCGTTTTCAACCATCCTCTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGAGGATCTTTCATCATTGCTGGTCTATATTTAGTTACTTGGGCATCTTTTAGAGAAAAACAAGCAACTCTTGGAGTTGGAGTACCTACTCTTGCTTCTTGGGTCTCTGAACCACTTATTCACGACAGAAGTGCACTCCAGAAAGGCCATTCTTTTTCGGTGTCCTCCAGTGTTTCCCCCAAAACATTATCAGATTAA 1185 0.4346 MATVGVGVGVGGDIWKAHMAMAMVQLFNGGYHVITKVALNVGINQLVFCVFRDLLALSILAPLAYIREKRIRPPTTKNLLVSFFFLGLTGIFGNQLLFLIGLSYTNPSYAAAIQPAIPVFTFMLAVMMGTERVNLVRYDGLAKVGGTIICVSGAVLMVLYRGPALIGYAEIDIVTQNEISAKGQPEPSGWLIGSLQDIGFDHFHLGVLCLIGNCFCMAAFLAIQAPVLKKYPANISVTAFSYFFGALLMVIVSLFMNNESTDWSLTSSEILAVIYAGTIASALNYGLITWCNKVLGPAMVSLYNPLQPAFSTILSQIFLGSPIYLGSIIGGSFIIAGLYLVTWASFREKQATLGVGVPTLASWVSEPLIHDRSALQKGHSFSVSSSVSPKTLSD* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00984 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
Lapu2g00984 394 Pfam EamA-like transporter family 20 158 IPR000620 GO:0016020
Lapu2g00984 394 Pfam EamA-like transporter family 205 342 IPR000620 GO:0016020
Lapu2g00984 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 348 - -
Lapu2g00984 394 PANTHER WAT1-RELATED PROTEIN 17 349 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00984 Lapu-Chr2 9170251 9189937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00984 10 276 Nodulin-like Gene Family AT3G45870 69.288 1.10e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00984 - - gmx:100787738 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00984 2 9170251 9189937 Lapu3g02096 3 40603728 40617153 PCT