Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00983 ATGGCGGAAGATTTAGAATCAACGGGAGTAGTATCAGTGAGGGGTGGATCGTGGAAAGCTCATACGGGCATGGCACTGTCGCAGGCATTCTATGGTGGCTACCATGTTATCACAAAAGTGGCCCTTAATGTTGGTGTCAACCAACTAGTTTTCTGCTTCTACAGGGATCTCCTTGCCTTTACTATTCTTGCTCCCGTTGCTTTTTTTCTTGAAAGACGGACTAGACCGCCCATTACCAAAAAGCTATTGATGTCATTCTTCTTTCTTGGATTGACCGGGGTATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCTGTACAGCCAACCATTCCAGTCTTTACATTTATGTTTACTTTGATGATGGGCATAGAAAGACTGAACTTACTCAGATATGAAGGTCTGGCAAAGGCTGGAGGAACTCTTATCTGTATTTCGGGTGCTGTATTTATGGTTTTCTATCGTGGTCCAGCTGTGATAGGGGGTATAGAAATGGATCAAGTTTCACAAATTAAACTAAGTTCCAGAGGTCAGCCTGAGCCTTCTGGACGGTTAATCAACAGTTTACTTAATATTGGATTTGACAGCTTTCAGCTTGGGGTTGTGGTCTTGATAGGGAACTGCATCTGCATGGCTGCTTTTCTAGCCCTTCAGGCTCCAATATTGAAAAAGTATCCTGCAAATCTTTCTGTCACAGCATATTCATTCGCCTTTGGAGTTGCACTGATGGTGATTGCATCATTTTTCATGGTTAACGAGTCAACTGACTGGATTTTGACGCGAACAGAGATACTAGCTGTTGCATATGCTGGATCTATTGCATCTGCTCTTAACTATGGAATCATTACATGGAGCAATAAGATCTTGGGGCCAACTTTGGTTTCTCTTTATAATCCACTTCAACCTGCATTTTCTGCCTTCCTTTCCCAAATTTTCCTTGGCACTCCAATTTACCTGGGAAGCATCCTAGGGGGATCTTTCATTGTTGCCGGTCTGTATATAGTTACATGGGCATCTTACAGGGAAAGACAAGAAACTTTTGAAGTTACTCCTAATGGTTCTTGTATCTCTGAACCACTTCTTCATGAAAAAAGTGAATACCAGAGTGGTCACATTCAGGGTCCTCCACCTTAA 1161 0.4212 MAEDLESTGVVSVRGGSWKAHTGMALSQAFYGGYHVITKVALNVGVNQLVFCFYRDLLAFTILAPVAFFLERRTRPPITKKLLMSFFFLGLTGVFGNQLLFLIGLSYTNPTYAAAVQPTIPVFTFMFTLMMGIERLNLLRYEGLAKAGGTLICISGAVFMVFYRGPAVIGGIEMDQVSQIKLSSRGQPEPSGRLINSLLNIGFDSFQLGVVVLIGNCICMAAFLALQAPILKKYPANLSVTAYSFAFGVALMVIASFFMVNESTDWILTRTEILAVAYAGSIASALNYGIITWSNKILGPTLVSLYNPLQPAFSAFLSQIFLGTPIYLGSILGGSFIVAGLYIVTWASYRERQETFEVTPNGSCISEPLLHEKSEYQSGHIQGPPP* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00983 386 Pfam EamA-like transporter family 24 145 IPR000620 GO:0016020
Lapu2g00983 386 Pfam EamA-like transporter family 208 345 IPR000620 GO:0016020
Lapu2g00983 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 350 - -
Lapu2g00983 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 145 - -
Lapu2g00983 386 PANTHER WAT1-RELATED PROTEIN 22 352 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00983 Lapu-Chr2 9170014 9189937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00983 103 373 Nodulin-like Gene Family AT5G45370 58.909 3.23e-116 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00983 - - gmx:100793730 626.706