Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00981 ATGCCACAGAACTGCATAGCACCAAAACCAGAATACTGCAATAGTCATCACTCTTTGGAAGGACCCCCAGAGATGACTGAGCCCCATAACTCAACTGTCCTTTCTCATCCCATGCAAACCAATGAACAACAACTTCCTTTTCCAAAACTCATTATGTACCCGATAACTCTGAAGTTTGAGGAACTGGTGTACAAAGTTAAACTAGAGCAAAAAGGAGGATGCTGGGGCAGTACATGGACTTGCAAGGAGAAGACCATACTGAATGGAATCACTGGTGTGGTGTGTCCAGGAGAAATACTAGCTATGTTGGGGCCATCAGGTAGTGGCAAAACCACACTTCTCACAGCACTTGGAGGTCGGCTCAGCGGCAAACTATCTGGTAAGATTACGTACAACGGCCAACCTTTCTCTGGTGCCATGAAGAGAAGAACAGGTTTTGTGGCTCAGGATGATGTGCTATACCCTCACCTAACTGTCACTGAAACTCTAGTGTTCACTGCACTTCTAAGGCTTCCCAACAGCTTGACCAGAGATGAAAAAGTTCAACATGTGGAGAGAGTAATCACTGAGCTAGGACTGACTCGTTGCAGGAGCAGCATGATAGGTGGCCCACTTTTTAGAGGAATATCAGGTGGAGAAAAAAAGAGAGTGAGCATAGGCCAAGAAATGCTCATCAATCCAAGCCTCCTGCTGCTGGATGAGCCTACTTCAGGCTTGGATTCTACCACAGCACAAAGGATCCTCAACACAATCAAACGCCTAGCTAGTGGGGGTAGAACTGTTGTCACCACTATTCACCAACCCTCTAGTAGGCTCTACTATATGTTTGATAAGGTGGTCTTGCTCTCTGAAGGCTGCCCCATATATTATGGTCCTGCTTCAACTGCCTTGGACTACTTCTCTTCTGTTGGCTTTTCCACCTGTGTGACTGTCAATCCAGCTGATCTCTTGCTTGATCTTGCCAACGGGATAGCCCCAGACTCCAAGCAAACAACTGAACAAAGTGAGGGACTGGAACAAGAGAGGAAACAAGTGAGAGAATCTCTCATCTCTGCTTATGAAAAGAATATAGCTACGAGCCTGAAAGCTGAGGTTTGCAGCCTGGAAGTGAACAACCACAATATCACAAAAGATGCTTGTGCAAGAAATTCGATAAAGCCAGAACAATGGAGCACGAGCTGGTGGCATCAGTTCAAAGTACTATTGCAAAGGGGAGTGAAGGAGCGAAGGTATGAAGCCTTCAACAGGCTGAGAATATTCCAAGTTGTAAGTGTCGCTTTTCTTGGTGGACTATTGTGGTGGCATACTCCAGAGTCACACATTGAAGATCGGGTTGCCTTGCTCTTTTTCTTTTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCTGTTTTCACATTCCCTCAAGAGAGGAGAATGCTGATCAAGGAACGGTCGTCAGGAATGTACCGCCTCTCTTCCTACTTTCTTGCCAGAACAATAGGAGACTTGCCATTGGAGCTTGCACTTCCAACTGCATTTGTTTTCATAATCTACTGGATGGGAGGGCTTAAACCTGATCCTGTGACTTTTATCCTTTCTCTTCTTGTGGTTCTTTACAGTGTTGTTGTCTCTCAAAGCCTTGGCTTAGCATTTGGTGCTATTTTGATGGAGATTAAACAGGCAACTACTCTAGCTTCTGTGACAACCCTTGTGTTCCTCATTGCTGGAGGGTACTATATACAACAGATTCCTCCATTCATTGTGTGGCTCAAGTACTTGAGCTACAGCTACTACTGTTACAAGCTGCTTTTAGGTGTCCAGTACAATGAAAATGACTACTATGAATGTTCAAAGGGAGAGCTGTGCAAAGTGGCAGATTTTCCTCCTATCAAATCAATGGGCTTGAATCATTTGTGGGTTGATGTGTGCATTATGGCCCTGATGTTGGTGGGTTATCGACTAGTTGCTTATTTTGCACTGCATAGAGTTAGGTAG 1977 0.4502 MPQNCIAPKPEYCNSHHSLEGPPEMTEPHNSTVLSHPMQTNEQQLPFPKLIMYPITLKFEELVYKVKLEQKGGCWGSTWTCKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLSGKLSGKITYNGQPFSGAMKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPNSLTRDEKVQHVERVITELGLTRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALDYFSSVGFSTCVTVNPADLLLDLANGIAPDSKQTTEQSEGLEQERKQVRESLISAYEKNIATSLKAEVCSLEVNNHNITKDACARNSIKPEQWSTSWWHQFKVLLQRGVKERRYEAFNRLRIFQVVSVAFLGGLLWWHTPESHIEDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPVTFILSLLVVLYSVVVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKYLSYSYYCYKLLLGVQYNENDYYECSKGELCKVADFPPIKSMGLNHLWVDVCIMALMLVGYRLVAYFALHRVR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00981 658 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 32 650 - -
Lapu2g00981 658 CDD ABCG_EPDR 54 291 - -
Lapu2g00981 658 SMART AAA_5 96 286 IPR003593 GO:0016887
Lapu2g00981 658 Pfam ABC-2 type transporter 397 602 IPR013525 GO:0016020|GO:0140359
Lapu2g00981 658 Coils Coil 328 348 - -
Lapu2g00981 658 Gene3D - 76 303 IPR027417 -
Lapu2g00981 658 Pfam ABC-2 type transporter 266 367 IPR043926 GO:0140359
Lapu2g00981 658 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 57 309 IPR003439 GO:0005524
Lapu2g00981 658 Pfam ABC transporter 88 237 IPR003439 GO:0005524
Lapu2g00981 658 FunFam ABC transporter G family member 22 74 303 - -
Lapu2g00981 658 ProSitePatterns ABC transporters family signature. 209 223 IPR017871 GO:0005524|GO:0016887
Lapu2g00981 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 301 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00981 Lapu-Chr2 9132884 9136389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00981 86 285 Calmodulin-binding Proteins AT2G36910 30.332 2.15e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00981 K05681 - gmx:100780191 1258.43