Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00960 ATGTCAGGAACGAGTTTCACCGTGGTGCATGGTGAGGCTGAGCTAGTGGTGCCAGCAGGACCAACTCCACGAGAAGTGAAGAATCTATCTGACATAGATGACCAAGAGGGGCTACGTTTCCAGCTTCCTGTGATCATGTTCTACAGAAATGGTTCAGTTGTGGAAGGAAAAGACAGTGCTAGGGTTATAAGATATGGTTTAGGTGAAGCACTGGTGCACTATTACCCTCTTGCTGGTAGACTGAGAGAAGGGCCAAACAGAAAGCTTAGGGTGGATTGCAGTGGTGAGGGGATCTTGTTTGTGACAGCTGAGGCTGATGTTTCACTGAAGGATTTAGGGGATAAGATTCTGCCACCCTGCCCTTATATGAAGGAGTTTCTTCTTGATGTTCCTGGATCACAACCCATTCTTGGATGCCCTCTCTTGTTGCTTCAGGTAACCCATTTATCATGTAGAGGATTTGTTTTGGCTGCACGCATGAACCACACAATGTGTGACTCACTGGGGTTAGTCCAATTTCTGACCATGGTGGGTGAGATTGCAAGAGGTGTTTCCATATCACAGTTCCCCGTGTGGCAAAGAGAGTTATTCAGTGCAAGAGACCCACCAAGAATCACTTGTGTACACCACGAATATGAAACCCAACATTGCCACGAACAAACATGGGACAGCCACGAAATGGCCCATCAATCATTTTTCTTCGGTCCCAAAGAGATTGCAACCCTTCGGAATCACCTTCCCATGCACCTAAAAAATTCTTCAACTTTTGAGATACTCTCTGCCTGTTTGTGGAAATGTCGAACTATAGCACTTGGTCTGAAGCCCGATGAGATTGTGGGGTTGTCACCCTTTATCACTGCTCGTGGAAAACTGGGCCTGCAAGTGCCCAGTGGGTACTATGGCAATGCCTTTGCCTTCCCAATGGCTCTTTCCAGGGCAGAGCCTTTGTGCCAAAACCCATTGGGGTATGCATTGGACTTGGTAAAAAAGGCAAAGGCCCAAATGGGTGCAGAGTATGTCAGTTCCGTGGCTGATCTTATGGTTCTTAAGGGTCGACCCAAGTATAGGACGAAAGGGAACTACCTTATTGCGGACACTACTCATGTGGGGTTCTATGAAGTTGATTTTGGGTGGGGGAGTCCTATATATGGAGGGCCTGCCGGGGCTATACCTTTTGTTAGCTTCTATGGACGTTTTAAGAACAGTGAAGGAGATGATGGAATTGTGGTACCAATTTTGTTGCCACACCATGTCATGAGGAGGTTTCTCTCTGAGCTGGTGAAGATCACAAACAGTATGCCACATAGGTCCATGTTGTAA 1320 0.4697 MSGTSFTVVHGEAELVVPAGPTPREVKNLSDIDDQEGLRFQLPVIMFYRNGSVVEGKDSARVIRYGLGEALVHYYPLAGRLREGPNRKLRVDCSGEGILFVTAEADVSLKDLGDKILPPCPYMKEFLLDVPGSQPILGCPLLLLQVTHLSCRGFVLAARMNHTMCDSLGLVQFLTMVGEIARGVSISQFPVWQRELFSARDPPRITCVHHEYETQHCHEQTWDSHEMAHQSFFFGPKEIATLRNHLPMHLKNSSTFEILSACLWKCRTIALGLKPDEIVGLSPFITARGKLGLQVPSGYYGNAFAFPMALSRAEPLCQNPLGYALDLVKKAKAQMGAEYVSSVADLMVLKGRPKYRTKGNYLIADTTHVGFYEVDFGWGSPIYGGPAGAIPFVSFYGRFKNSEGDDGIVVPILLPHHVMRRFLSELVKITNSMPHRSML* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00960 439 Pfam Transferase family 12 425 - -
Lapu2g00960 439 Gene3D - 8 209 IPR023213 -
Lapu2g00960 439 Gene3D - 210 424 IPR023213 -
Lapu2g00960 439 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00960 Lapu-Chr2 8900199 8903780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00960 12 429 Monolignol Biosynthesis Gene Families AT5G48930 28.571 1.46e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00960 - K19861 gmx:100817429 724.546