Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00959 ATGAATGCTTTTTGTCTCCTGTTTCCTTCTGTAGCATGTCTTCCTATGCTTTTTATTATCAACTCTCTCTTGTGTGTCCCAAGCACAACTGCCTCTATATTAGGAAACCAGACCGATCATTTGGTGTTGCTCAAATTTAAGGAATCAATATCAAATGACCCTTATAAAATCATTGCCTCTTGGAATAGTTCCATCCATTTTTGCAAGTGGCCTGGAGTTACATGCAATTCCATGAAACAAAGAGTTATGGAGTTAAACCTAGAAGGAAAACAGTTGCAAGGTCTCATACCACCCCATATAGGCAATCTCTCTTTCCTAACCAGGCTTAACCTTGGAAACAACAGCTTTTGTGGAAAGATTCCACAAGAACTGGGTCGGTTGTTACAGTTACAAAACTTGTCGCTAACCAATAACTCATTGAAAGGAGAAATACCTACAAACTTGACCAGATGTTCCAACCTTAGAGAGTTACACTTGTTCGGTAACAATTTGAGTGGAAAAATACCAATGGAAATTGGCTCCCTGCAAAAGCTTCAAGAAATGAGCCTGGCGGTAAACAATCTGACAGGAGTAATCCCATCTTCCATAGGGAATCTTTCATCCCTCGTTTCTCTCTCAATCGGTGTCAACTACTTCGAGGGAAATATTCCACGAGAAATTTGTCTCCTCAAAAACTTGTCATTGATATCATTGCATGTCAACAAGCTGATAGGTACATTTCCTTCTTGTCTTTACAATATGTCATCTCTTACCATAATCTCAGCTGCAGACAATCAATTTAATGGCTCCCTTCCACCAAACATGTTCCATACCCTCCCTAATCTCCGAGAATTCCTTGTTGGTGGGAATCATATCTCAAGTTCAATCCCAACTTCCATTGCAAATGCATCTGTCCTCCAAACACTTGATGTTGGTACAAATCATTTAGTGGGTCAAGTTCCAAGTCTAGGAAAGCTGCAATACCTTTGGTTCCTTAGTCTGTACAGCAATAACTTAGGTGACAATACGACAAAGGACTTGGAGTTTTTAAAATCCTTGGCCAATTGTAGCAAGTTGGAAGTGGTTTCTATTTCCTATAATCGTTTTGGAGGGAGTTTGCCAAATTTTATGGGAAATTTATCCACCAAACTTAGTCAATTATATCTTGGGGGTAATCACATATCAGGAAAAATTCCTGCAGAATTAGGCAGTCTAGTTAGCTTAACAATCTTGACCATGGAAATTAACCACTTTGAAGGGATTATTCCGGCCACTTTTGGGAAGTTTCAGAAGCTACAAAAGTTAGAGTTGAGTAGAAACAAGTTGACAGGAGATATTCCTGATTTTATAGGCAACCTTACTCAGCTGTATTATTTGGGCATGGCAGAAAATATGTTAGAAGGAAAGATCCCTCCAAGTATAGGAAACTGTCAAAAATTACAATACCTTAACCTTTGGAAAAACAAACTTGGAGGAAGCATACCCTTAGAGGTTTTTACTCTTTTCTCTTTAACAAACTTGTTGGACTTGTCACAAAATTCATTGAGTGGCAGGCTTCCTGTTGAAGTTGGCCGGTTAACAAATATTGGGAAGATGAGTGTGGCCGAAAATAAATTGTCTGGTGAAATTCCTGAAACCATTGGAGACTGCATAAGCTTGGAGTACCTTTGTCTGCAAGGAAATTCCTTTCATGGAATCATACCTTCCTCTTTGGCTTCACTCAAAGGTCTTCGAGTACTAGACATGTCACGAAATCTTCTGGTTGGATCAATTCCTAAGGATCTACAAAATATTTCTTTCTTAGAATACTTCAATGTATCTTTTAATATGTTAGAGGGTGAAGTACCACTGGAAGGTGTATTTGGAAATGCAAGTGAGTTAGCCGTGGTTGGGAACAATAAGCTTTGTGGGGGTGTTTCACAGTTGCATCTACCACCGTGTCCTATCAAAGGTAAGAAACCGGTGAAACACTTGAACTTTGTATGGATCGCTATGATGATAGTTAGTGTGGTTGTTTTTCTTCTCGTTCTGCCATTTTTTGTATCTATCTACCGAGTGAGGAAAAGAACCCACAAAACTCCATCGTCTGATTTGCCGACAATTGACCAAGTGGATAAGGTTTCATACCAAAACCTACACCATGGAACCGATGGGTTCTCAGTTAAAAATTTGATAGGATCTGGAAATTTTGGCTCCGTATACAAAGGGACTATTGAGTTAGAAGGAGATAAAAGTGTTGTTGCCATAAAGGTTGTAAACCTTCAAAAGAAGGGAGCTCAAAAGAGTTTCATTGCTGAATGTAATGCCTTGAAAAATATAAGGCATCGAAACTTGGTCAAGACTTTAACATGTTGTTCTAGCATAGATCATAGAGGCCAAGAATTCAAAGCTCTTGTTTTTGAGTACATGACAAATGGAAGTCTAGAAAGATGGTTGCATCCAGAAATAGAAATTGCAAAGCAGCCTGCTAGATCATTAAACCTTGACCAAAGATTAAATATTATCATTGATGTTGCTTCTGCTTTTCACTATCTTCACTACGAATGTGGGCAAGCCATTATTCACTGTGATTTGAAGCCAAATAATGTTCTTCTCGATGATGGATTGGTAGCTCATGTAAGCGACTTTGGTTTAGCTCGAAGGCTCACAGCTATTGCAGTTTCTCCAAAACAAACTAGCACTATTGAAATAAAGGGCACAGTTGGCTATGCTCCTCCAGAATATGGAATGGGATCAGAGGTGTCTATCGAAGGTGACATGTACAGTTTTGGAATTCTTGTTTTGGAAATGTTAACCGGAAGAAGACCAATAGATGAAATGTTTGGAGATGGTCTTAATCTCCATAACTACGTCAAAATTTCAATTCCAAACTACATTCCCCAGATTGTGGACCCGAATATTCTTCCTAAGGGATTAAAGGTGGCGGCTAATAACCAAAATCTTCCCCCAATGCCTCCTGTAGTAGAGAAATGCTTACTATCACTTTTTAGGATTGCACTTGCTTGTTCAACTGAATCGCCAAAAGAAAGAATGAGTATGGTTGATGTCATTAGGGAGCTCCATTTGATCAAAAGTTCCTTTTCATCATGA 3069 0.3894 MNAFCLLFPSVACLPMLFIINSLLCVPSTTASILGNQTDHLVLLKFKESISNDPYKIIASWNSSIHFCKWPGVTCNSMKQRVMELNLEGKQLQGLIPPHIGNLSFLTRLNLGNNSFCGKIPQELGRLLQLQNLSLTNNSLKGEIPTNLTRCSNLRELHLFGNNLSGKIPMEIGSLQKLQEMSLAVNNLTGVIPSSIGNLSSLVSLSIGVNYFEGNIPREICLLKNLSLISLHVNKLIGTFPSCLYNMSSLTIISAADNQFNGSLPPNMFHTLPNLREFLVGGNHISSSIPTSIANASVLQTLDVGTNHLVGQVPSLGKLQYLWFLSLYSNNLGDNTTKDLEFLKSLANCSKLEVVSISYNRFGGSLPNFMGNLSTKLSQLYLGGNHISGKIPAELGSLVSLTILTMEINHFEGIIPATFGKFQKLQKLELSRNKLTGDIPDFIGNLTQLYYLGMAENMLEGKIPPSIGNCQKLQYLNLWKNKLGGSIPLEVFTLFSLTNLLDLSQNSLSGRLPVEVGRLTNIGKMSVAENKLSGEIPETIGDCISLEYLCLQGNSFHGIIPSSLASLKGLRVLDMSRNLLVGSIPKDLQNISFLEYFNVSFNMLEGEVPLEGVFGNASELAVVGNNKLCGGVSQLHLPPCPIKGKKPVKHLNFVWIAMMIVSVVVFLLVLPFFVSIYRVRKRTHKTPSSDLPTIDQVDKVSYQNLHHGTDGFSVKNLIGSGNFGSVYKGTIELEGDKSVVAIKVVNLQKKGAQKSFIAECNALKNIRHRNLVKTLTCCSSIDHRGQEFKALVFEYMTNGSLERWLHPEIEIAKQPARSLNLDQRLNIIIDVASAFHYLHYECGQAIIHCDLKPNNVLLDDGLVAHVSDFGLARRLTAIAVSPKQTSTIEIKGTVGYAPPEYGMGSEVSIEGDMYSFGILVLEMLTGRRPIDEMFGDGLNLHNYVKISIPNYIPQIVDPNILPKGLKVAANNQNLPPMPPVVEKCLLSLFRIALACSTESPKERMSMVDVIRELHLIKSSFSS* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00959 1022 SUPERFAMILY L domain-like 375 630 - -
Lapu2g00959 1022 SUPERFAMILY Protein kinase-like (PK-like) 687 1015 IPR011009 -
Lapu2g00959 1022 Gene3D Ribonuclease Inhibitor 266 344 IPR032675 -
Lapu2g00959 1022 FunFam LRR receptor-like serine/threonine-protein kinase EFR 683 795 - -
Lapu2g00959 1022 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 796 1022 - -
Lapu2g00959 1022 SUPERFAMILY L domain-like 37 332 - -
Lapu2g00959 1022 Gene3D Transferase(Phosphotransferase) domain 1 796 1021 - -
Lapu2g00959 1022 SMART serkin_6 712 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00959 1022 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 75 342 - -
Lapu2g00959 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Lapu2g00959 1022 ProSitePatterns Protein kinases ATP-binding region signature. 718 743 IPR017441 GO:0005524
Lapu2g00959 1022 ProSiteProfiles Protein kinase domain profile. 712 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00959 1022 SMART LRR_typ_2 422 446 IPR003591 -
Lapu2g00959 1022 SMART LRR_typ_2 567 590 IPR003591 -
Lapu2g00959 1022 SMART LRR_typ_2 247 271 IPR003591 -
Lapu2g00959 1022 SMART LRR_typ_2 398 421 IPR003591 -
Lapu2g00959 1022 SMART LRR_typ_2 175 198 IPR003591 -
Lapu2g00959 1022 SMART LRR_typ_2 272 296 IPR003591 -
Lapu2g00959 1022 SMART LRR_typ_2 127 151 IPR003591 -
Lapu2g00959 1022 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Lapu2g00959 1022 Gene3D Ribonuclease Inhibitor 345 641 IPR032675 -
Lapu2g00959 1022 Gene3D Ribonuclease Inhibitor 39 153 IPR032675 -
Lapu2g00959 1022 Gene3D Ribonuclease Inhibitor 162 265 IPR032675 -
Lapu2g00959 1022 Pfam Leucine rich repeat 400 459 IPR001611 GO:0005515
Lapu2g00959 1022 Pfam Leucine rich repeat 545 604 IPR001611 GO:0005515
Lapu2g00959 1022 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 344 1014 - -
Lapu2g00959 1022 FunFam LRR receptor-like serine/threonine-protein kinase EFR 343 646 - -
Lapu2g00959 1022 Gene3D Phosphorylase Kinase; domain 1 693 795 - -
Lapu2g00959 1022 Pfam Protein tyrosine and serine/threonine kinase 714 1011 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00959 Lapu-Chr2 8892598 8895835 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00959 36 1020 Receptor kinase-like Gene Family AT3G47570 46.479 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lapu2g00959 PK_Tyr_Ser-Thr 4.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00959 - - gmx:100786600 1652.11