Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00957 ATGAAGAGCATAAACGACGACGGTTCCACGCAAGATCTCGACCCTCAGAGCGACCACAGCTCCGATTACTTAGCTCACCCTAACTCTAACACCCAACCTCACCCTCACCCGCGCCGTCCGCGGGGTTTCGCGGCTGCGGCGGCGGCGGCGACCACCACCAATTCCGTCGCTAAGGGAAAGAAGGAGAGGGAGAAGGAGAAGGAGCGCACCAAGCTCCGCGAGCGACACCGTCGAGCCATCACCAGCCGCATGCTCGCCGGCCTCCGCCAGTACGGCAATTTCCCCCTGCCAGCACGTGCCGACATGAACGACGTGCTCGCTGCGCTCGCGCGTGAGGCAGGTTGGGTTGTTGACGCCGACGGCACCACGTACCGCCAGTGCCCCCCTCCCTCTCACATGGGGTCATTTGCGGCTAAATCAGTTGAAAGTCAACTCTCTGCTGGTTCTTTGAGGAATTGTTCTGTTAAGGAAACCATTGAGAATCAGACATCTGTGCTTAGAATTGATGAATGCTTGTCGCCTGCGTCCATTGATTCTGTTGTAATTGCAGAAAGGGACTCAAAGAATGAGAAATATACAAATGCGAGCCCCATCAATGCCGTTGACTGCCTGGAGGCTGATCAGCTTATGCAAGATATTCATTCTGGGGTGCACGAAAATGATTTTACAGGCACACCATATGTTCCTGTTTATGTAAAGCTTCCAGCTGGTATTATTAACAAATTTTGCCAGTTGATTGATCCTGAAGGCATTAGGCAGGAGCTAATGCATATCAAGTCTTTAAATGTAGATGGTGTTGTTGTGGATTGTTGGTGGGGCATTGTTGAAGGCTGGAGCTCACAGAAATATGTGTGGTCTGGTTATAGGGAGCTTTTTAACATCGTTAGAAAATTCAAACTTAAGTTACAGGTTGTTATGGCGTTTCATGAATGTGGAGGGAATGATTCTAGTGATGCATTGATTTCCCTACCACAATGGGTTTTGGATATTGGAAAAGACAACCAGGATATATTCTTCACAGATCGTGAAGGACGGAGAAATACTGAATGTCTTTCTTGGGGGATTGACAAAGAACGAGTTCTCAAAGGCAGAACTGGAATTGAGGTCTATTTTGATATGATGAGAAGCTTTCGGACAGAGTTTGATGACCTGTTTGCAGAAGGTCTGATTTCTGCTGTTGAAGTTGGACTTGGAGCATCCGGAGAGCTGAAATATCCTTCTTTCTCAGAAAGAATGGGATGGAGTAGTCCTGTTTTCTGTCTCATCTGCTATGGGCAGTGCTATGATAAATACCTGCAACATAGTCTGCGCAGAGCAGCCAAATTGCGTGGTCACTCTTTCTGGGCTAGAGGACCTGATAATGCTGGACATTACAATTCTATGCCGCACGAAACTGGATTCTTTTGTGATCGAGGTGATTATGACAACTACTATGGACGATTCTTCTTACATTGGTACTCCCAGACATTAATAGACCATGCAGATAATGTTTTGTCTCTTGCCACCCTTGCTTTTGAGGAGACAAAAATAATTGTCAAGGTTCCTGCTGTATACTGGTGGTACAAGACTCCTAGTCATGCAGCAGAGTTGACAGCAGGATATCACAACCCAACAAATCAGGATGGGTACTCTCCTGTGTTTGAGGTTCTAAGAAAACATGCTGTCACCATGAAATTTGTCTGCTTAGGGTTTCATCTTTCCAGCCAGGAAGCTAATGAATCATTGATTGATCCAGAGGGTCTGAGTTGGCAGGTGTTAAACTCAGCTTGGGATCGTGGGTTGATGGCTGGTGGAGAGAATGCACTCCTTTGCTATGATAGAGAAGGGTACAAGAGATTGGTTGACACGGCAAAGCCGAGAAATGATCCTGATCATCGACATTTTTCATTCTTTGTTTATCAACAACCATCTTTGCTGCAGGCAAATGTTTGCTTGTCTGAATTGGATTTCTTCGTCAAATGCATGCATGGGTATCGTGTATAG 1983 0.466 MKSINDDGSTQDLDPQSDHSSDYLAHPNSNTQPHPHPRRPRGFAAAAAAATTTNSVAKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVDADGTTYRQCPPPSHMGSFAAKSVESQLSAGSLRNCSVKETIENQTSVLRIDECLSPASIDSVVIAERDSKNEKYTNASPINAVDCLEADQLMQDIHSGVHENDFTGTPYVPVYVKLPAGIINKFCQLIDPEGIRQELMHIKSLNVDGVVVDCWWGIVEGWSSQKYVWSGYRELFNIVRKFKLKLQVVMAFHECGGNDSSDALISLPQWVLDIGKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGLISAVEVGLGASGELKYPSFSERMGWSSPVFCLICYGQCYDKYLQHSLRRAAKLRGHSFWARGPDNAGHYNSMPHETGFFCDRGDYDNYYGRFFLHWYSQTLIDHADNVLSLATLAFEETKIIVKVPAVYWWYKTPSHAAELTAGYHNPTNQDGYSPVFEVLRKHAVTMKFVCLGFHLSSQEANESLIDPEGLSWQVLNSAWDRGLMAGGENALLCYDREGYKRLVDTAKPRNDPDHRHFSFFVYQQPSLLQANVCLSELDFFVKCMHGYRV* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00957 660 MobiDBLite consensus disorder prediction 1 74 - -
Lapu2g00957 660 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 160 657 IPR001554 GO:0000272|GO:0016161
Lapu2g00957 660 MobiDBLite consensus disorder prediction 1 32 - -
Lapu2g00957 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 283 301 IPR001554 GO:0000272|GO:0016161
Lapu2g00957 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 474 493 IPR001554 GO:0000272|GO:0016161
Lapu2g00957 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 508 524 IPR001554 GO:0000272|GO:0016161
Lapu2g00957 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 305 326 IPR001554 GO:0000272|GO:0016161
Lapu2g00957 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 543 566 IPR001554 GO:0000272|GO:0016161
Lapu2g00957 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 581 603 IPR001554 GO:0000272|GO:0016161
Lapu2g00957 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 262 276 IPR001554 GO:0000272|GO:0016161
Lapu2g00957 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 398 420 IPR001554 GO:0000272|GO:0016161
Lapu2g00957 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 525 536 IPR001554 GO:0000272|GO:0016161
Lapu2g00957 660 Pfam Glycosyl hydrolase family 14 246 623 IPR001554 GO:0000272|GO:0016161
Lapu2g00957 660 SUPERFAMILY (Trans)glycosidases 222 657 IPR017853 -
Lapu2g00957 660 Gene3D Glycosidases 218 660 - -
Lapu2g00957 660 MobiDBLite consensus disorder prediction 57 74 - -
Lapu2g00957 660 Pfam BES1/BZR1 plant transcription factor, N-terminal 58 204 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00957 Lapu-Chr2 8873450 8880951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00957 14 657 Glycoside Hydrolase AT5G45300 65.872 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lapu2g00957 Glyco_hydro_14 3.1e-79 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00957 K01177 - gmx:100777004 1221.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00957 2 8873450 8880951 Lapu2g00957 2 8873450 8880951 ECH