Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00954 ATGAGAAATGGAAGCTTGGAGCAATGGTTGCATCCTAGAGCATTAGAGCATCGAAGAACATTGAGCCTTGATCAAAGATTAAATATCATGATTGATATTGCTTCTGCATTACATTATCTTCATCAAGAATATGAGCAATCAATCATTCACTGTGACTTAAAGCCTAGCAATGTCTTGCTTGATGATGACATGGTTGCTCATGTCAGTGATTTTGGAATAGCAAGGGTTCTCCCAACCATTAACAGCACCACTTCTAAGCAAACAACTACAACTGGAATAAAAGGAACGATTGGCTATGCTCCCCCAGAGTATGGAGTGAATTATGAGGTTTTGGACCCGTCACTTGTAGCAGAACTGGAACAAGCAACAACAGAAGAAGAAAACACTCAGAATCTTACTACAACCACTGAAAAGCACTTCATTTCAATCGTTAGAATTGGACTTGCTTGTTCAGTAGAGTCGCCAAACGAAAGAATGAGTATAGTTGATGTCACTAGAGAGCTAAACAAAATCAAGAGTCTTTCTAGCTGGTAA 534 0.3914 MRNGSLEQWLHPRALEHRRTLSLDQRLNIMIDIASALHYLHQEYEQSIIHCDLKPSNVLLDDDMVAHVSDFGIARVLPTINSTTSKQTTTTGIKGTIGYAPPEYGVNYEVLDPSLVAELEQATTEEENTQNLTTTTEKHFISIVRIGLACSVESPNERMSIVDVTRELNKIKSLSSW* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00954 177 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 109 173 - -
Lapu2g00954 177 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Lapu2g00954 177 Gene3D Transferase(Phosphotransferase) domain 1 1 176 - -
Lapu2g00954 177 SUPERFAMILY Protein kinase-like (PK-like) 1 168 IPR011009 -
Lapu2g00954 177 SMART serkin_6 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00954 177 FunFam Os07g0541700 protein 1 96 - -
Lapu2g00954 177 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00954 177 Pfam Protein kinase domain 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00954 Lapu-Chr2 8837734 8838516 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00954 1 106 Receptor kinase-like Gene Family AT3G47570 59.459 1.82e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lapu2g00954 Pkinase 4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00954 - - gmx:100801459 205.682