Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00942 ATGGCACTGCTCGAATTTAGAAAATCCATATTCTCTGATCCACGTGGAATTTTTCTCTCTTGGAATACCTCTATTCACTTTTGTAACTGGCATGGAATCACATGTGATCCAATGCATCAAAGAGTTTCAGAGTTAAACTTGCAGGGATACATGTTGAAGGGATTCATATCACCTTACATTGGCAATCTATCTTATATCAGAAACATCAACCTCGGAGACAACAACTTCTATGGCAAAATCCCACAAGAATTGGGGCGATTGTCACAGCTGCATAACCTTTCTGTAGGAAATAATTCATTGGTAGGAGAAATTCCTAAAAACTTGACAGGTTGCACTAATCTCAAGTTTTTACATTTAGGTGGGAACAATTTTATTGACAAAATACCTATCCTAATTGGCTCACTTGGAAAGCTTCAACAATTGTTCCTTTCAAATAACAAGTTTACTGGAGGAATCCCATCATTCATGGGAAATCTTTCATCTCTAACTCTTCTTTCTTTAGGTAAAAACAAGTTAGAGGGATCTATTCCACAAGAAATATGTCGTCTCAAAAGCTTGACAGGGATAGCATTTCACGTAAACAAACTGACAGGCACATTTCCTACCTGTCTTTATAATATGTCATCTCTTACTATAATCTCAGCAACAGACAATCAATTTAATGACTCTCTTCCAGCCAACATGTTCCACACTCTCCCCAATCTTCAAAAACTTTTAATTTCTGGCAACCAAATCATAGGTTCAATCCCACCTTCCATCACGAATGCATCTTTCCTTTCATATCTTGATACTGATCATAACTATTTGACAGGACAAGTTCCTAGTCTGAGCAAGTTACAGGGTCTTCAACGTCTATCTTTGTCAGAGAATAATCTAGGTCACAATTCAACTGATGACTTAGAATTTTTAAAATCATTGACAAACTGTAGTAACTTGCAAGTGCTAGATATAGGCTTCAACAATTTTGGAGGTCATTTGCCAAATTCTTTGGGCAATTTATCTATGAAACTCAATGAACTGTATCTGGGAGGCAACCATATATCAGGAGAAATTCCTGCAGCCATAGGAAACCTACTTGGCTTAATTGTCTTGTCCATGAGTCATAACCGCATTTATGGACTTATCCCTACAACTTTTGGTAAGTTTCAGAAGATGCAAATGTTGCGCTTACGTGGAAACAAGTTATCAGGGGGGATAGGAACCTTCATTGGAAACCTAAGTCAACTGTTTCATTTGGATGTGGGAGAAAATATGTTAGAAGGAAAGATTCCTCCAAGCATAGGAAACTGCCAAAGGTTGCAACACTTGGTACTTTCACGAAACAACCTTACAGGAACCATTCCCGTAGAGCTTTTCAGTATTTCCTCTCTAACAACCTCCTTGAATTTATCACAAAACTTGTTGAATGGTAGCATACCTGTACAAGTGGGAAACCTTAAAAATCTTTATTCCTTAGATATGTCTGAGAATAATCTGTCTGATCACATTCCTCTATCCATAGGAGAATGCACAATTTTGGAGTACCTCAATTTGAAAGGAAATTCTTTAGAGGGAATCATACCACCCTCTTTGGCATCACTCAAAGGACTTCAAAGTTTAGACCTCTCACAAAACAGTTTGGGGGGGTCAATTCCTAATGATCTGCAGAAAATTTCTGGGTTAGAATACTTGAATGTGTCTTTTAACATGTTGGTTGGTGAGGTACCAATGGGAGGTATCTTTCAAAATGCCAGCGCGTTAGTGGTTACCGGAAACAATAATCTTTGTGGAGGTATTTCAGAACTGCATCTACCATCATGCCCTGGTGGTAAGAAACTGGGAAAATTTCATCTATTCAAGTTGATAGCAACGATAGTTAGTGCAGTCGCTTTTCTTCTCATCATGTCAATTATTCTAACTATCTATCGGACGAGGAACAAGAAACAATCTTTGGATTCACCAGCACTAGATCAACTGCCTAAAGTTTCATACCAAAGCCTACACAATGGAACCAATGGGTTCTCAATCACAAATTTGATAGGCTCTGGAAATTTTAGCTTTGTCTACAAAGGAATTCTTAACTCCGAAGAGAAAGTTGTTGCCATAAAGGTTCTAAACCTTCAAATAAGAGGATCTCACAAGAGTTTTATCACTGAATGCAATGCACTAAAAAATATTAAACATCGAAATGTAGTTCGAATTTTAACATGTTGTTCTGGAATAGACTACAAATGTCAGGAGTTCAAAGCTCTAATTTTTGAGTACATGAAAAATGGAAGCTTAGAGCAATGGCTGCATCCGAGCGCATTAAGTGCTGAACATTCGAGAACATTAAACCTTGATCAAAGATTAAATATCATGATTGATGTTGCTTCTGCTTTACATTATTTTCACTATGAATGTGAGCAGTTGATCATTCACTGTGATTTAAAACCAAGCAATGTCCTTCTTGATGATGACTTGATTGCTCATGTTAGTGATTTTGGTCTAGTAAGACTTTTCTTAACAATTAGTGGTACCACTCCTCAGCAAACAAGTACAAGTGGCATAAAGGGGACTATCGGCTATGCTCCTCCAGAGTATGGAATGTGTTCTGCGGTGTCTACAGCTGGTGACATCTACAGTTTTGGAATTCTTATATTGGAGATGCTTACAGGAAGAAGACCCATAGATGAAATCTTTGAAGATGGTCAAAATTTGCGTACCTTTGTGGAAAGTTCATTTCCTGATAATCTTTTACAGATTCTGGACCCATCGCTTGTACTAAACCAAGAAGAAGCAACAGTAGAGGAAGAAAACAGTCAGAATCTTACTCCAACAGTTGAAAAATGTTTAGTTTCACTCTTTAAAATTGGACTTGTTTGTTCAATGGAATCACCAAAAGAAAGAATGAATATGGTTGATGTTACTAGGGAGTTAAACAAAATAAGGAAAACCTTTTCTTGCAGGGTAAAATAA 2937 0.3732 MALLEFRKSIFSDPRGIFLSWNTSIHFCNWHGITCDPMHQRVSELNLQGYMLKGFISPYIGNLSYIRNINLGDNNFYGKIPQELGRLSQLHNLSVGNNSLVGEIPKNLTGCTNLKFLHLGGNNFIDKIPILIGSLGKLQQLFLSNNKFTGGIPSFMGNLSSLTLLSLGKNKLEGSIPQEICRLKSLTGIAFHVNKLTGTFPTCLYNMSSLTIISATDNQFNDSLPANMFHTLPNLQKLLISGNQIIGSIPPSITNASFLSYLDTDHNYLTGQVPSLSKLQGLQRLSLSENNLGHNSTDDLEFLKSLTNCSNLQVLDIGFNNFGGHLPNSLGNLSMKLNELYLGGNHISGEIPAAIGNLLGLIVLSMSHNRIYGLIPTTFGKFQKMQMLRLRGNKLSGGIGTFIGNLSQLFHLDVGENMLEGKIPPSIGNCQRLQHLVLSRNNLTGTIPVELFSISSLTTSLNLSQNLLNGSIPVQVGNLKNLYSLDMSENNLSDHIPLSIGECTILEYLNLKGNSLEGIIPPSLASLKGLQSLDLSQNSLGGSIPNDLQKISGLEYLNVSFNMLVGEVPMGGIFQNASALVVTGNNNLCGGISELHLPSCPGGKKLGKFHLFKLIATIVSAVAFLLIMSIILTIYRTRNKKQSLDSPALDQLPKVSYQSLHNGTNGFSITNLIGSGNFSFVYKGILNSEEKVVAIKVLNLQIRGSHKSFITECNALKNIKHRNVVRILTCCSGIDYKCQEFKALIFEYMKNGSLEQWLHPSALSAEHSRTLNLDQRLNIMIDVASALHYFHYECEQLIIHCDLKPSNVLLDDDLIAHVSDFGLVRLFLTISGTTPQQTSTSGIKGTIGYAPPEYGMCSAVSTAGDIYSFGILILEMLTGRRPIDEIFEDGQNLRTFVESSFPDNLLQILDPSLVLNQEEATVEEENSQNLTPTVEKCLVSLFKIGLVCSMESPKERMNMVDVTRELNKIRKTFSCRVK* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00942 978 SUPERFAMILY L domain-like 336 590 - -
Lapu2g00942 978 Gene3D Ribonuclease Inhibitor 1 276 IPR032675 -
Lapu2g00942 978 SUPERFAMILY Protein kinase-like (PK-like) 642 966 IPR011009 -
Lapu2g00942 978 SMART serkin_6 667 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00942 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Lapu2g00942 978 Pfam Leucine rich repeat 336 395 IPR001611 GO:0005515
Lapu2g00942 978 Pfam Leucine rich repeat 506 564 IPR001611 GO:0005515
Lapu2g00942 978 Gene3D Transferase(Phosphotransferase) domain 1 749 976 - -
Lapu2g00942 978 ProSitePatterns Protein kinases ATP-binding region signature. 673 696 IPR017441 GO:0005524
Lapu2g00942 978 Gene3D Phosphorylase Kinase; domain 1 648 748 - -
Lapu2g00942 978 SMART LRR_sd22_2 87 110 - -
Lapu2g00942 978 SMART LRR_sd22_2 527 556 - -
Lapu2g00942 978 SMART LRR_sd22_2 279 302 - -
Lapu2g00942 978 SMART LRR_sd22_2 479 511 - -
Lapu2g00942 978 SMART LRR_sd22_2 382 408 - -
Lapu2g00942 978 SMART LRR_sd22_2 159 191 - -
Lapu2g00942 978 ProSiteProfiles Protein kinase domain profile. 667 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00942 978 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 749 978 - -
Lapu2g00942 978 Gene3D Ribonuclease Inhibitor 277 606 IPR032675 -
Lapu2g00942 978 Pfam Protein kinase domain 669 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00942 978 SMART LRR_typ_2 479 503 IPR003591 -
Lapu2g00942 978 SMART LRR_typ_2 159 183 IPR003591 -
Lapu2g00942 978 SMART LRR_typ_2 279 302 IPR003591 -
Lapu2g00942 978 SMART LRR_typ_2 87 111 IPR003591 -
Lapu2g00942 978 SMART LRR_typ_2 135 157 IPR003591 -
Lapu2g00942 978 SMART LRR_typ_2 527 550 IPR003591 -
Lapu2g00942 978 SMART LRR_typ_2 207 231 IPR003591 -
Lapu2g00942 978 SMART LRR_typ_2 431 454 IPR003591 -
Lapu2g00942 978 SMART LRR_typ_2 406 430 IPR003591 -
Lapu2g00942 978 SMART LRR_typ_2 358 381 IPR003591 -
Lapu2g00942 978 SMART LRR_typ_2 232 256 IPR003591 -
Lapu2g00942 978 FunFam LRR receptor-like serine/threonine-protein kinase EFR 301 605 - -
Lapu2g00942 978 Pfam Leucine rich repeat N-terminal domain 2 36 IPR013210 -
Lapu2g00942 978 Pfam Leucine Rich Repeat 311 333 IPR001611 GO:0005515
Lapu2g00942 978 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 37 300 - -
Lapu2g00942 978 PANTHER OS04G0122200 PROTEIN 69 186 - -
Lapu2g00942 978 FunFam LRR receptor-like serine/threonine-protein kinase EFR 638 748 - -
Lapu2g00942 978 SUPERFAMILY RNI-like 44 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00942 Lapu-Chr2 8752242 8755292 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00942 2 973 Receptor kinase-like Gene Family AT3G47570 45.030 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lapu2g00942 Pkinase 2.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00942 - - gmx:100785561 1339.71