Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00940 ATGATTGTCCTTGCATCAGGTAATGATACTGATTATTTGGCACTGTTGAAGTTCAAGGAATCCATATCCAGTGATCCGTATGGAATCCTCCTATCTTGGAATACTTCTACTCACTTTTGTAATTGGCATGGGGTCACATGCAATCCCATGCTTCAAAGAGTTACCAAGTTGAGATTAGGAGGACACAAGTTGAAGGGATTTATATCTCCTTACATTGGCAATCTCTCTTGCATGAAAAACTTTGTACTAAGAAACAACAGTTTCTACGGAGAAATCCCACAAGAACTGGGACGATTGTCACAATTGGAGAACATCTCTGTTGGAAATAATTCTTTGACAGGGGAAATACCTACAAATTTGTCAAGTTGCACTAATCTTGAAAGATTACACTTTTATGGGAACAATCTAATTGGTAAAATACCGATCAAAATTGGTTCACTTGGAAAGCTTCAATTTTTTAGCGTGGTTAGGAACCAGCTAACAGGAGGAATTCCATCATCCATAGGGAATCTTTCATCTCTAGTTTATTTATGGTTGGATACTAACAAGTTAGAGGGAAATATTCCACAAGAAATATGTTATCTCAGAAGTTTGACAACTATATCATTGCATATAAACAAATTGACCGGAACAATTCCTTCTTGTGTTTATAATATCTCATCTCTCACTGCAATCTCAACTGTGGAAAATCAATTAAATGGATCTCTTCCACCCAACATGTTCAACACACTCCCCAATCTCCAGTATTTTCTTATGAGTGGAAATCAAATCTCAGGTCTAATTCCCCCTTCCATCACAAATGCATCTATGCTTTCATCACTTTATCTTAGCGAAAACCATTTTACAGGACAAGTGCCAAGTCTAGGGAAGCTCCAACATCTTCAACGTCTATCTTTTTTTCATAACAATTTAGGTGACAATTCAGCTAAAGATTTGGAATTTTTGAAATCATTGACAAACTGTACTGAGTTGCAACTTTTAGATTTATCCCACAATAATTTTGGAGGTCATTTGCCAAATTATCTAGGCAATTTGTCCACCCAACTCAGTACAATACATCTTGCAGTTAATAAAATATCAGGAGAAATCCCTGTGTCAATAGGAAATCTAGTTGACTTAATTCTCTTGAGTATATATGGAAACCGCATTGAAGGTGTTATCCCAACAACTTTTGGGAAGTTACACAAGATGCAATTTTTAAGCTTAGGTAGAAACAAACTGTCTGGAGAGATAGGATCCTTCATAGGTAACCTTACTCGACTGTTTTATTTGAATATAGGAGAAAATATGTTGGAAGGAAATATTCCTCCAAGTATAGGAAATTGTCAGAAGTTACAATACTTACTCCTTCAACGGAACAACCTTAGAGGAAGCATTCCTGTAAAAGTTCTTTCGTCTCTAACAAATTTGTTGCAGTTGTATTTGTCACAAAACTCATTGAGTGACAGTATACTGGAGGAAGTGGGCAACCTAAGGAATCTTGACACGCTAGGTATATCTCATAATCGTTTGTCTGGTCGCATTCCTATAACTATCGGGCAATGCATAATGTTGGAGGCTCTCTTTTTGGATGGAAATTCCTTACAAGGAATCATACCATCCTCTTTAGCATCACTCAAGAGTCTTAGACTTTTAGATCTGTCACAAAACAACTTGTCTGGATCAATTCCTATCTTTCTTCAAAATATTTCTCTCTTGGAATATTTCAACGTGTCTTTTAACATGTTGGATGGTGAGGTACCAACTGAAGGTGTGTTTCGAAATGCAAGTCGATTAGGGGTGACTGGGAACAGTAAACTCTGTGGAGGTATTTCAGAATTGCATCTTCCACCATGCTCTGTCAAAGGCGAGAAACTAGCAAAACGCCGCAAATTGAAGTTGATAGCAACGCTAGTTAGTGTGGTTGCTTTTCTTCTTATACTGTTAGTGATTCTAACCATCTACTGGATGAGGAAAAGGATTAAGAAACCATTTTTGCCTTTACCAACAGTTGACCAGCTCACTAAAGTTTCATACCAAAGCCTACACAATGGAACTTGTGGCTTCTCAACTGAAAACTTTATTGGGTCCGGAAATTTTAGCTCTGTTTACAAAGGAACTCTTGAATCAGAAGACAGGGTTGTTGCCATAAAGGTCTTAAACCTGGAAAAAGTAGGAGCTACCAGGAGTTTCATTAATGAATGCAGTGTACTTAAAAATGTTAAACATCGAAATCTGGTTCAGATTTTGACATGCTGTTCTAGCACAGATTACCAAGGTCAAGAATTTAAAGCTCTAATTTTTGAGTACATGACAAATGGAAGCTTAGAGCAATGGCTGCACCCGAACACACTGAGCGAAGAACATCCCATAACACTCAGTCTTGATCAAAGATTAAATATCATGATTGATGTGTCTTCTGCATTAAATTATCTTCATTATGAATGTGAGCAATCAATCATTCATTGTGATCTAAAGCCAAGCAATGTTCTTCTTGATGATGACATGATTGCTCATGTGAGTGATTTTGGCATATCAAGAATTCTCTCAACCATTAGTGGTACAACTTCTAAGCAAACAAGTACAATTGAAATAAAGGGGACTGTTGGCTATGCTCCACCAGAGTATGGAGTGGGCTTTAAGGCGTCTATGAATGGTGACATGTATAGTTTCGGGATTCTTGTGTTAGAGATGCTCACTGGAAGAAGACCCACTGATGAAAGCTTTGAAAATGGTCAAAATTTGCATAAATTTGTGGAGAGTTCATTTTCACATAATATTTTAGAGATTTTGGATCCAGCACTTGTACCAAAACGTGGACAACTGACAATAGAAGAAGAAAACAATAAGAATCTTGATCCAACGGTTGAAGAGTGCTTAGTTTCACTCTTTAAGATTGGCCTTGCTTGTTCAGTGGAATCCCCAGAAGGAAGAATGAATATGACGAATGTTACTAGAAAACTAACCAAAATCAGAAAATCCTTTCTTGCAGGTAAGATAGATGGAAAATGA 2991 0.3714 MIVLASGNDTDYLALLKFKESISSDPYGILLSWNTSTHFCNWHGVTCNPMLQRVTKLRLGGHKLKGFISPYIGNLSCMKNFVLRNNSFYGEIPQELGRLSQLENISVGNNSLTGEIPTNLSSCTNLERLHFYGNNLIGKIPIKIGSLGKLQFFSVVRNQLTGGIPSSIGNLSSLVYLWLDTNKLEGNIPQEICYLRSLTTISLHINKLTGTIPSCVYNISSLTAISTVENQLNGSLPPNMFNTLPNLQYFLMSGNQISGLIPPSITNASMLSSLYLSENHFTGQVPSLGKLQHLQRLSFFHNNLGDNSAKDLEFLKSLTNCTELQLLDLSHNNFGGHLPNYLGNLSTQLSTIHLAVNKISGEIPVSIGNLVDLILLSIYGNRIEGVIPTTFGKLHKMQFLSLGRNKLSGEIGSFIGNLTRLFYLNIGENMLEGNIPPSIGNCQKLQYLLLQRNNLRGSIPVKVLSSLTNLLQLYLSQNSLSDSILEEVGNLRNLDTLGISHNRLSGRIPITIGQCIMLEALFLDGNSLQGIIPSSLASLKSLRLLDLSQNNLSGSIPIFLQNISLLEYFNVSFNMLDGEVPTEGVFRNASRLGVTGNSKLCGGISELHLPPCSVKGEKLAKRRKLKLIATLVSVVAFLLILLVILTIYWMRKRIKKPFLPLPTVDQLTKVSYQSLHNGTCGFSTENFIGSGNFSSVYKGTLESEDRVVAIKVLNLEKVGATRSFINECSVLKNVKHRNLVQILTCCSSTDYQGQEFKALIFEYMTNGSLEQWLHPNTLSEEHPITLSLDQRLNIMIDVSSALNYLHYECEQSIIHCDLKPSNVLLDDDMIAHVSDFGISRILSTISGTTSKQTSTIEIKGTVGYAPPEYGVGFKASMNGDMYSFGILVLEMLTGRRPTDESFENGQNLHKFVESSFSHNILEILDPALVPKRGQLTIEEENNKNLDPTVEECLVSLFKIGLACSVESPEGRMNMTNVTRKLTKIRKSFLAGKIDGK* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00940 996 FunFam LRR receptor-like serine/threonine-protein kinase EFR 659 763 - -
Lapu2g00940 996 SUPERFAMILY L domain-like 347 602 - -
Lapu2g00940 996 Pfam Protein kinase domain 683 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00940 996 SMART serkin_6 682 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00940 996 SUPERFAMILY Protein kinase-like (PK-like) 656 981 IPR011009 -
Lapu2g00940 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Lapu2g00940 996 Gene3D Ribonuclease Inhibitor 289 619 IPR032675 -
Lapu2g00940 996 Gene3D Ribonuclease Inhibitor 8 158 IPR032675 -
Lapu2g00940 996 PANTHER LEUCINE RICH REPEAT KINASE 2 315 985 - -
Lapu2g00940 996 SUPERFAMILY L domain-like 9 304 - -
Lapu2g00940 996 FunFam Leucine-rich repeat protein kinase family protein 169 309 - -
Lapu2g00940 996 Pfam Leucine rich repeat 518 576 IPR001611 GO:0005515
Lapu2g00940 996 Pfam Leucine rich repeat N-terminal domain 9 48 IPR013210 -
Lapu2g00940 996 Gene3D Transferase(Phosphotransferase) domain 1 764 991 - -
Lapu2g00940 996 SMART LRR_typ_2 99 123 IPR003591 -
Lapu2g00940 996 SMART LRR_typ_2 171 195 IPR003591 -
Lapu2g00940 996 SMART LRR_typ_2 539 561 IPR003591 -
Lapu2g00940 996 SMART LRR_typ_2 370 393 IPR003591 -
Lapu2g00940 996 SMART LRR_typ_2 321 345 IPR003591 -
Lapu2g00940 996 SMART LRR_typ_2 491 515 IPR003591 -
Lapu2g00940 996 SMART LRR_typ_2 467 490 IPR003591 -
Lapu2g00940 996 SMART LRR_typ_2 244 268 IPR003591 -
Lapu2g00940 996 SMART LRR_typ_2 418 442 IPR003591 -
Lapu2g00940 996 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Lapu2g00940 996 Gene3D Phosphorylase Kinase; domain 1 663 763 - -
Lapu2g00940 996 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 764 993 - -
Lapu2g00940 996 FunFam LRR receptor-like serine/threonine-protein kinase EFR 310 618 - -
Lapu2g00940 996 Gene3D Ribonuclease Inhibitor 219 288 IPR032675 -
Lapu2g00940 996 Gene3D Ribonuclease Inhibitor 159 218 IPR032675 -
Lapu2g00940 996 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 8 168 - -
Lapu2g00940 996 ProSiteProfiles Protein kinase domain profile. 682 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00940 Lapu-Chr2 8730539 8733645 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00940 8 989 Receptor kinase-like Gene Family AT3G47570 44.512 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lapu2g00940 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00940 - - gmx:100801459 1378.62