Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00938 ATGGCTAGATCTAAACGACGACGGTCGGGTATAAGTGCTAGCAATGTCAGACCGAAAATGATTTTTGTGCCTATTCTGGAAGATGGAGTGTTTCGTTTTGATTGTTCTGTAAATGATAGAGAAGCAGCAAGTCCCAGTGTTTCTTTTGTGAATAGCAAGGACAGAGACGCACCTATCTCTACTGAGAAGGTTCCTCTGTATAACCCTACGTTTGAAATTCGATTAGAGCAGCAGATTGTCAAACTTGAGCTGCCTGTAGGTTCTTCTCTTTATGGTACTGGAGAAGTTAGCGGACAGCTTGAGAGAACAGGCCAAAGAGTTTTTGCATGGAACACCAATGCATGGGGTTATGGACCTGGAACTACATCTTTATACCAATCACATCCATGGGTGTTAGCTGTTCTTCCGAATGGCGAGGCAATAGGAATCCTTGCTGACACTACAAGGCGCTGTGAGATCGATCTGAGGAAAGAATCAACAATACAGTTTGTTGCTCCATCCCCATATCCTGTCATTACATTTGGTCCTTTTGCTTCACCTACTGCAGTGTTAATTTCTCTATCAAAAGCAATTGGAACTGTATTTATGCCCCCAAAGTGGTCTTTAGGCTATCATCAATGCCATTCAAGTTATTTATCTGATCAGGGAGTTCAGGAGCTTGCAAAAACGTTCCAGAAGAAGTCCTTACCTTGTGATGTGATATGGATGGATATTGATTACATGGATGGTTTTCGTTGTTTCACATTTGACAAGGAGCGTTTCCGAGATCCCATGTCTTTAGTGAAAGATCTCCGTTGTAGTGGTTTTAAAGTCATTTGGATGCTTGATCCTGGAATTAAGCAGGAAGAGGGTTATTTTGTATATGATAGTGGTTCTAAAAATGATGTTTGGATCCAAAATGCAGATGAAACTCCTTATGTAGGGGAGGTGTGGCCCGGGCCTTGTGTCTTCCCCGACTATACACAGTCAAAAGTTCGTGCATGGTGGGCAAATTTAGTTAAAGATTTCATTTCCAATGGTGTTGATGGTATATGGAATGATATGAATGAACCAGCTATTTTTAAGGTTGAAGAAAAAACAATGCCTGGTAGCAATGTTCATAGAGGAGATAGTGAACTTGGAGGTTGTCAGAATCATTCTTTCTATCACAATGTGTATGGTCTTCTGATGGCAAGATCAACCTATGAAGGCATGAAACTAGCTAATGAAGAGAAGCGTCCTTTTGTTCTTACAAGAGCTGGATTCATTGGCAGCCAAAGGTATGCAGCAACATGGACTGGTGATAATCTTTCAACCTGGGAGCATCTTCATATGAGTATCTCCATGGTACTTCAGCTGGGACTTAGTGGTCAGCCACTTTCAGGTGCTGATATTGGTGGATTTGCTGGAAATGCAACACCTAGACTTTTTGGAAGGTGGATGGGTGTTGGTTCCTTGTTTCCCTTTTGTCGAGGGCATTCTGAAGCTTGCACCACTGATCACGTACCTTGGTCTTTTGGGGAAGAGTGTGAAGAAGTTTGCCGATTGGCATTGAAGAGACGGTACCGCCTAATCCCACTAATCTACACTCTTTTTTATTTTGCTCATACACGGGGTACACCAGTGGCAACCCCTACTTTCTTTGCTGATCCGAAAGATCCTAGCCTGAGGAAGCTTGAAAATTCGTTTTTGCTCGGTCCAGTCTTAGTGTATGCAAGCACCATACATGCACAGGGGTTGGATAAATTGGAGATTACTTTGCCTAAGGGGATATGGTTGGGGTTTGATTTCAACGATGCACATCCGGATTTGCCAGCCTTATACTTAAAAGGTGGCTCAATTATTCCTGTGGGACTCCCCCATCTGCATGTTGAAGAAGCTAATCCTTCAGATGACTTGACTCTTCTAGTGGCTTTAGATGAACATGGAAAAGCTGAAGGTGTTCTTTTTGAGGATGACGGTGATGGATACGAATTCACAAAAGGCAATTATTTGTTAACACATTATGTGGCTGATCTTACATCATCAGTTGTTACTGTGAGTGTACACAAAACTGAAGGATCATGGCAAAGGCCTACACGCCGCCTGCATATTCAATTATTGCTTGGTGGGGGTGCAATGCTTGAAACATGGGGAACTGATGGAGAAGTTCTGCAACTAGTCTTGCCTTCTGAAGATGAGGTGCTGAAGCTAGTATCTACTAGTGAGAAGCAATACAAGGAACGGTTGGACAATGCAATTCCAATTCCTGATGTAGAAGAGGTTTCTGGACCCAAGGGAACAGAAAGGACTCCCGTTGAACAGACAAGCGACATAGAAGACCATGTTAGTAAGATGTCTAAGGAGGTCGATATTGCATCTGATGGAGCTAATAATAAGACTGTTGATTGTAGTGACGCATTTAACACTACAGAGGTTTTCCCTTCTCGAGATGCTATGCTGAATTGGGCTCGAGAAGTAGCAAAGGAGAATGGATTTGTCCTTACTATTTTGAGGTCCGAAACATGTTTGAAAAGTAATAAAAAAAATAACAAAGGGAAGACATATGTGATTATGGGTTGTGAAAGGAGTGGAAAATATAGACCATACAAGAATACATTATCTAAGGTGACTAGTACCAAAAAATGCGAGTGTCCCTTCAAGCTTAGGGCAAAAGCTTTGAAAAAGAATGAAAGATGGGTTGTTAAAGTAATGTGTGGTTGTCACAACCATGACTTAGGGGAAACATTGGTGGTGGGACATTCATATGCTGGCCGATTAAGTGCTGAAGAGAAGTCTTTAGTCATTGATATGACAAAGAACATGGTGGAGCCGAGAAACATACTACTAACGTTGAAAGATCATAATAATGAGACTACTATTAGGCATATTTACAATGCTCGACAAGCTTATCGGTCTTCCCAGAAAGGTCCTAGGACTGAAATGCAACGCCTACAAAAGTTATTGGATAATGATCAATATGTGTATTGGAATAGAAAGGTGGATGATTCTGATGCTATCAGTGATATATTTTGGACGCATCCTGATGCCATCAAACTTCTAAGTGCTTTCCACACTGTCTTGCTCCTTGATAATACTTATAAAGTCAATAGGTATCGATTGCCACTACTTGAGATTGTTGGTGTTACTTCAACAGAGTTAACATTCTCTGTGGCATTTGCTTATCTAGAGTCTGAGCAAGTTGATAACTACACTTGGGCACTAGAGAAGTTAAGAGAATTGATTGTCAAAGACAGTGAGATACCTCCAGTAATTGTAACTGTTAGAGACAGTTCTCTAATGAATGCAGTGCAGGCAGTCTTTCCAAGCTCTTCGAATTTGTTGTGTCGATTTCATATAAGCAAGAATGTGAAGGCTAAATGCAAGATGATAGTTCATCCGAAGGAGAAATCTGACTTGGTGATGGATGCATGGCACAATGTTATGAATTCTCCTAATGAGGGTGAGTACATGCAACGTTTGGCATTATTTGACAAAGTTTGCTCAGATTTTCCAAATTTTGGTGATTATGTGAAAAATACGTGGCTTACTCCTCACAAGGAAAAATTTGTCATGGCATGGATAGATCGAGTGATGCATTTGGGTAACACAACACTCAATAGAGTGGAAACATCACATTGGAGGTTGGAGAACTTGCTTGAAGATAGTGGGGGGGACATTTCTTGTTGTTGGGATGCGGTGGACAACATGATTAAATTGCAACACAAGGAGATTAAGACGTCATTTGAGAAAAGCATAAACACAGTGGAATACAATACTCCATTCTACAGCAAGTTGCGGGGATTTGTATCAAGGAGTGCATTGAGTTATATATCTGACCAATATGACCGAATTAAGACCGTTGGTAGTGATAGTTCTATATGTGGATGCATAATTAGAACTACACATGGTCTACCCTGTGCATGTGAACTTGCTAAGTACAATATGCATCATCCAGTACCCTTGCAGGCAGTTCATGTTCATGGGAGTGGTTTAAATTTCGGTTTCCAAGAAACAAGCGAAGTGGGTTCTGAAGTATCATTGCAACCAGTACCCTTGCAGGCAATTCATGTTCACTGGAGGAGGTTGCACTTCGGTGTCCAAGAAATGAGCAAAGAGGGGTCTGAGGTATCATTGCAACGTGAAATTGATGCTTTGCACAAGCAATTTCGGGTACTTGATTATGCTGGGAAAGTTACTTTGAAGGCCAGATTGCGTGAACTAGCCTTGCCTGATATAACTTTACTGTGTTCAGCTCCTGATAAGGTAAGAACAAATGATGCTCCACAGGATTTAGGGTCGAAGAGAGATAAATCAATTGAATGTGATCCTTTAAATATGGAGCATATAGATTCACCACATTCTGCCCGTGATAGCATGACAGCTCACCCTTCATCTGAGAAACCTGTCCATGAGTCTAAATGCATGGAAGTTTTGCCAACAATGGACCAAATTCCGGTTGAAATTCATCAATTTAATGAAGGCATTGTAGATGATGTTAAAGCAGATGAGAATCGTGGTTAA 4482 0.4121 MARSKRRRSGISASNVRPKMIFVPILEDGVFRFDCSVNDREAASPSVSFVNSKDRDAPISTEKVPLYNPTFEIRLEQQIVKLELPVGSSLYGTGEVSGQLERTGQRVFAWNTNAWGYGPGTTSLYQSHPWVLAVLPNGEAIGILADTTRRCEIDLRKESTIQFVAPSPYPVITFGPFASPTAVLISLSKAIGTVFMPPKWSLGYHQCHSSYLSDQGVQELAKTFQKKSLPCDVIWMDIDYMDGFRCFTFDKERFRDPMSLVKDLRCSGFKVIWMLDPGIKQEEGYFVYDSGSKNDVWIQNADETPYVGEVWPGPCVFPDYTQSKVRAWWANLVKDFISNGVDGIWNDMNEPAIFKVEEKTMPGSNVHRGDSELGGCQNHSFYHNVYGLLMARSTYEGMKLANEEKRPFVLTRAGFIGSQRYAATWTGDNLSTWEHLHMSISMVLQLGLSGQPLSGADIGGFAGNATPRLFGRWMGVGSLFPFCRGHSEACTTDHVPWSFGEECEEVCRLALKRRYRLIPLIYTLFYFAHTRGTPVATPTFFADPKDPSLRKLENSFLLGPVLVYASTIHAQGLDKLEITLPKGIWLGFDFNDAHPDLPALYLKGGSIIPVGLPHLHVEEANPSDDLTLLVALDEHGKAEGVLFEDDGDGYEFTKGNYLLTHYVADLTSSVVTVSVHKTEGSWQRPTRRLHIQLLLGGGAMLETWGTDGEVLQLVLPSEDEVLKLVSTSEKQYKERLDNAIPIPDVEEVSGPKGTERTPVEQTSDIEDHVSKMSKEVDIASDGANNKTVDCSDAFNTTEVFPSRDAMLNWAREVAKENGFVLTILRSETCLKSNKKNNKGKTYVIMGCERSGKYRPYKNTLSKVTSTKKCECPFKLRAKALKKNERWVVKVMCGCHNHDLGETLVVGHSYAGRLSAEEKSLVIDMTKNMVEPRNILLTLKDHNNETTIRHIYNARQAYRSSQKGPRTEMQRLQKLLDNDQYVYWNRKVDDSDAISDIFWTHPDAIKLLSAFHTVLLLDNTYKVNRYRLPLLEIVGVTSTELTFSVAFAYLESEQVDNYTWALEKLRELIVKDSEIPPVIVTVRDSSLMNAVQAVFPSSSNLLCRFHISKNVKAKCKMIVHPKEKSDLVMDAWHNVMNSPNEGEYMQRLALFDKVCSDFPNFGDYVKNTWLTPHKEKFVMAWIDRVMHLGNTTLNRVETSHWRLENLLEDSGGDISCCWDAVDNMIKLQHKEIKTSFEKSINTVEYNTPFYSKLRGFVSRSALSYISDQYDRIKTVGSDSSICGCIIRTTHGLPCACELAKYNMHHPVPLQAVHVHGSGLNFGFQETSEVGSEVSLQPVPLQAIHVHWRRLHFGVQEMSKEGSEVSLQREIDALHKQFRVLDYAGKVTLKARLRELALPDITLLCSAPDKVRTNDAPQDLGSKRDKSIECDPLNMEHIDSPHSARDSMTAHPSSEKPVHESKCMEVLPTMDQIPVEIHQFNEGIVDDVKADENRG* 1494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00938 1493 CDD GH31_glucosidase_II_MalA 192 532 - -
Lapu2g00938 1493 SUPERFAMILY Galactose mutarotase-like 71 165 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lapu2g00938 1493 CDD GH31_N 70 192 - -
Lapu2g00938 1493 Pfam Domain of unknown function (DUF5110) 626 693 IPR033403 -
Lapu2g00938 1493 Gene3D - 517 599 IPR013780 -
Lapu2g00938 1493 MobiDBLite consensus disorder prediction 1434 1458 - -
Lapu2g00938 1493 Pfam Galactose mutarotase-like 89 154 IPR025887 -
Lapu2g00938 1493 Pfam MULE transposase domain 1013 1109 IPR018289 -
Lapu2g00938 1493 PANTHER ALPHA-GLUCOSIDASE 82 674 - -
Lapu2g00938 1493 ProSitePatterns Glycosyl hydrolases family 31 active site. 343 350 IPR030458 -
Lapu2g00938 1493 Pfam Transcription factor AFT 843 899 IPR014842 GO:0000981|GO:0036086
Lapu2g00938 1493 Gene3D - 605 694 IPR013780 -
Lapu2g00938 1493 SUPERFAMILY (Trans)glycosidases 189 532 IPR017853 -
Lapu2g00938 1493 Gene3D Glycosidases 195 516 - -
Lapu2g00938 1493 Pfam Glycosyl hydrolases family 31 179 608 IPR000322 GO:0004553|GO:0005975
Lapu2g00938 1493 Gene3D glycosyl hydrolase (family 31) 38 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00938 Lapu-Chr2 8697584 8714127 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00938 20 763 Glycoside Hydrolase AT3G23640 72.252 0.0 1158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lapu2g00938 Glyco_hydro_31 2.3e-125 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00938 - - vra:106777609 2678.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00938 2 8697584 8714127 Lapu2g00938 2 8697584 8714127 ECH