Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00934 ATGTCTCTCCTCAGCCGATTCTTCTACAAGCGTCCCCCTGATGGCTTACTCGAATTCACGGACCGAGTCTATGTATTCGATTCCTGCTTCTCAACCGAAGCCCTGCCCGAGGGAATGTACCAGCTCTACCTTCGCCAAATCCTCTCCGACCTCCACGAGGACTTCCCGGAATCTTCCTTCCTCGCTCTCAACTTCCGCGACGGCGACTCCCGCAGCCGCTTCTCCCGCCTCCTCTGCGACCTCGACGCCACCGTCATCGACTATCCCAAGCAGTACGAGGGCTGCCCACTCCTCCCCCTCTCCCTCCTCCACCACTTCCTGCGCCTCTGCGATACCTGCCTCGCTGACCCCGCCGCCGTGATCCTCTTCCACTGCGAGCGCGGCGGCTGGCCCCTCCTCGCCTTTCTCCTCGCTGCTTTCCTCGTTTTTCGGAAGGCGCAGAGCGGGGAGCGCAAGATTCTGGAGATGGTTCACAGGGAGGCGCCGAAGGGGCTGCTGCAGCTTCTGTCGGCGCTCAACCCGATGCCGTCGCAGCTGCGGTATGTGCAGTATGTTGCGCGAAGGAACATTGGCGCGGAGTGGCCACCGCCGGAGAGGGCGCTCTCTCTGGACTGTGTGATACTCAGAGGGGTTCCTGGGTTTGATGGGGGGAATGGGTGCAGGCCGTTGTTTAGGATTTTTGGGAGGAATTTGCTTAGTAAAGGCGGGCTTTCCACGCAGATGATTTATAATATGCATAAGAAGAAAAAGAGTTTGAGGCACTATAGACAGGCAGACTGTGATGTGATTAAGATTGATATTCAATGCTTAGTGCAAGGCGATGTAGTGTTGGAGTGTGTGCATTTGGATTTGGATCCAGAGAGGGAGGTGATGATGTTTCGGGTGATGTTCAACACAGCATTCATTCGGTCTAACATTTTGATGCTAAATGCTGAGAACTTAGACATTCTGTGGGATTCGAAGGAGCGGTATCCAAAGGGCTTCCGGGCTGAGGTTTTGTTTGGGGAGGTTGAAAACATAAGTCCTCAAAGGGCTCCGACAAGTATTTTAGATGGTGAGGTGAAAGGTGGATTGCCAATTGAGGCATTTTCAAGGGTTCAAGAACTTTTCAGTGGTGCAGAATGGATTGAAAGTGGTGATTCTGCAGCTGTATGGCTGCTCAAGCAGCTTACAGTCTTAAATGACGCCAAAGAGTTTTCAAGGTTTCAGGGTAGAGGAAGTTGGTATTCATCACCTGCTGACTCTGAAGAAGAAAATAATGAATCAAGCACTGCTGATAGTTCAGATGAGGCATTTGATGTTATTCCCAGGTCTTATACTGATCCTTCAAAATTATTTACATCTGACACACCTGATTTGGTCCATTTAACTTTCGAAAACAACGGTGGAGATTATGTAAATCTCACTTCAAGAACACTTGATCAGTCACTAACTGATGATGTTTCATCACCTCGTCATGCTCTAAGTAAGGAATATTCTCCTTGTTTGTCTCCACCATCACCTTCACCTGTTCCCCCTACCCAACGTCATCATATACCATCGGCACCCCCTCCTCCATCAATACCTATACAACCAGGCTTTGCTCCTCCCCCACCTCCGCATCCTTTAGTTCAGAATCTAAACAATGCTTTTACATTACCTTGTCCTCCTCCATCCCCTCTCCCTCCTATAGGTAGCGACACCAATAGCACTCCTGGTTTACCTCCACCTCCTTCAGGATCTGTACAAACAACTTTGGCCCCTCCACCACCACCTCCTCCTCCTCTTCCTCCTGGTCCAGGACCTGTACAGACAAATTCAGTCCCACCACCTCCTCCTCCTCCTCCTCCTCCTCCAGGTCTTGAGCAAATAGGTTCAGCTCCACCACCGCTAGGTCTTGTGCGAACAGATTTAGCCCCTCCACCACCTCCTCCTCCTCCTCCTCCTCCTCCAGGTCTTGAGCAAATAGGTTCAGCTCCACCACCGCTAGGTCTTGTGCGAACAGATTTAGCCCCTCCACCACCTCCTCCTCCTCCTCCTCCTCCAGGTTTAGCCTCAGCACCTCCTCCTCCTCCACCTCCACCTCCCTCAGGATCAGTACAAACAGGTTCAGTTCCACCACCTCCACCTCCACCTCCACCCCCTCCAGGTCCTGCACGAACAGGTTCAGCTCCACCACCTCCACCTCCACCTCCTTCAGGTGCTGTACAAGGTTCTATCCCGCCACCACCTCCACCTCCTCCAGGTCCAGTACGAACAGGTTCAGCTCCACCACCTCCACCTCCACCTCCTTCAGGTACTGTACAAGGTTCTATCCCGCCACCACCTCCAACTCCTCCAACTCCTCCACCTCCTCCAGGTCCTGTACGAGCAGGTTCAGCTCCACCACCACCTCCACCTCCTCCAGGTCCTGCACGAGCAGGTTCAGCTCCACCACCACCGCCTCCACCTCCTCCAGGTCCTGCACGAGCAGGTTCAGCTCCACCACCACCTCCGCCTCCTCCAGGTCCTGCACGAGCAGGTTCAGCTCCACCACCACCTCCGCCTCCTCCAGGTTCTGTACGAGCTGGTTCAGCTCCACCGCCTCCTCCTCCTCCAAGTGTACGGACAGGTTCAGCTCCACCACCACCACCACCACTGGCACCAAAGCCCCCCGGTGCTCCTCCTCCTCCACCTGGTCGTGGTGCATCTCCAATGCCACCTCCACCTCCAGCAACTACAGCCTCGGGTGTGGCAGCACCACCTAGCAAAGCTTCAACAACAAATATTGGTAGAGGTCGTGGTAGTGGTGTTACTGCTAATGCTCCAAAGAAAACTTTGCTAAAACCCCTACACTGGGTGAAGGTTGCTCGAGCAGCCAAGGGAAGTCTATGGGCTGATTCACAGAAACAGGATAGTGGAACAAGGGCCCCTGAGATAGATATATCAGAACTTGAGAGCCTGTTTTCAGCAGCATCTACTTCTGATGGGAGTAGTACTAAAGCTGGAGGTAGGCGTGGACCTAATATTAACAAACCGGAGAAAGTACAATTGGTTGACTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGAGATGCTCAAAGCAGTACTGGCATTGGATTCTTTAGTTCTTGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCAACAAAGGAAGAGATGGAGATGTTGAAGAATTATTCAGGAAACAAGGAGATGCTTGGAAAGTGTGAACAGTTTTTTATGGAGCTGATGAAGGTTCCACGTGTGGAATCCAAATTAAGGGTTTTTGCTTTTAAAATCACTTTTTCTTCTCAGGTGAATGATTTGAAGATAAATTTGAACACAATCAACAGTGCGGCCAGAGAGGTGAAAGAATCTGGAAAATTGCGTCAAATAATGCAGACTATTCTTACTCTGGGAAATGCCTTGAATCAAGGAACAGCTCGGGGATCAGCTGTTGGATTCAAATTGGATAGCCTTCTGAAATTATCTGATACTCGTGCCAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTAGCTGAGAAAATGCCAGAATTGCTAGATTTTGATAAGGATCTTGTCCATTTGGAAGCAGCTTCTAAGATTCAACTAAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTAGAGAAAGTTGAGCAAGAACTCGCTGCTTCTGAAAATGATGGGGCTATATCTACAGGATTTCGTAAGGTTTTGAAGAATTTTCTTGATATTGCTGAAGCTGATGTGAGGTCCCTTATATCATTGTATTCGGAAGTGGGAAGAAGTGCAGACTCTTTGTCCCAGTACTTTGGAGAGGATCCAGCTAGATGCCCCTTTGAACAAGTGACACAAATCCTTGTTGTCTTTGTCAAGATGTTCAACAAGTCAAGGGAGGAGAATGAAAGGCTGGCAGATGCTGAAAAAAAGAAGTTAGAGAAAGAAGCCTTGAAGGAAAGGGCAGCAAATAATTCACATCCCAAAAGAGATGCGATTCGGTAG 4014 0.4978 MSLLSRFFYKRPPDGLLEFTDRVYVFDSCFSTEALPEGMYQLYLRQILSDLHEDFPESSFLALNFRDGDSRSRFSRLLCDLDATVIDYPKQYEGCPLLPLSLLHHFLRLCDTCLADPAAVILFHCERGGWPLLAFLLAAFLVFRKAQSGERKILEMVHREAPKGLLQLLSALNPMPSQLRYVQYVARRNIGAEWPPPERALSLDCVILRGVPGFDGGNGCRPLFRIFGRNLLSKGGLSTQMIYNMHKKKKSLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNAENLDILWDSKERYPKGFRAEVLFGEVENISPQRAPTSILDGEVKGGLPIEAFSRVQELFSGAEWIESGDSAAVWLLKQLTVLNDAKEFSRFQGRGSWYSSPADSEEENNESSTADSSDEAFDVIPRSYTDPSKLFTSDTPDLVHLTFENNGGDYVNLTSRTLDQSLTDDVSSPRHALSKEYSPCLSPPSPSPVPPTQRHHIPSAPPPPSIPIQPGFAPPPPPHPLVQNLNNAFTLPCPPPSPLPPIGSDTNSTPGLPPPPSGSVQTTLAPPPPPPPPLPPGPGPVQTNSVPPPPPPPPPPPGLEQIGSAPPPLGLVRTDLAPPPPPPPPPPPPGLEQIGSAPPPLGLVRTDLAPPPPPPPPPPPGLASAPPPPPPPPPSGSVQTGSVPPPPPPPPPPPGPARTGSAPPPPPPPPSGAVQGSIPPPPPPPPGPVRTGSAPPPPPPPPSGTVQGSIPPPPPTPPTPPPPPGPVRAGSAPPPPPPPPGPARAGSAPPPPPPPPPGPARAGSAPPPPPPPPGPARAGSAPPPPPPPPGSVRAGSAPPPPPPPSVRTGSAPPPPPPLAPKPPGAPPPPPGRGASPMPPPPPATTASGVAAPPSKASTTNIGRGRGSGVTANAPKKTLLKPLHWVKVARAAKGSLWADSQKQDSGTRAPEIDISELESLFSAASTSDGSSTKAGGRRGPNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPEMLKAVLALDSLVLDIDQVENLIKFCPTKEEMEMLKNYSGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNDLKINLNTINSAAREVKESGKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELAASENDGAISTGFRKVLKNFLDIAEADVRSLISLYSEVGRSADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERLADAEKKKLEKEALKERAANNSHPKRDAIR* 1338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00934 1337 MobiDBLite consensus disorder prediction 627 650 - -
Lapu2g00934 1337 Coils Coil 1299 1328 - -
Lapu2g00934 1337 Gene3D Formin, FH2 domain 924 1309 IPR042201 -
Lapu2g00934 1337 Coils Coil 1205 1232 - -
Lapu2g00934 1337 MobiDBLite consensus disorder prediction 905 921 - -
Lapu2g00934 1337 SMART PTEN_C2_2 196 1036 IPR014020 -
Lapu2g00934 1337 SMART it6_source 526 1337 IPR015425 -
Lapu2g00934 1337 SUPERFAMILY Formin homology 2 domain (FH2 domain) 937 1318 - -
Lapu2g00934 1337 MobiDBLite consensus disorder prediction 977 997 - -
Lapu2g00934 1337 FunFam Formin-like protein 923 1310 - -
Lapu2g00934 1337 PANTHER FORMIN-J 779 1327 - -
Lapu2g00934 1337 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 198 337 IPR035892 -
Lapu2g00934 1337 MobiDBLite consensus disorder prediction 496 537 - -
Lapu2g00934 1337 Pfam Formin Homology 2 Domain 929 1299 IPR015425 -
Lapu2g00934 1337 ProSiteProfiles Formin homology-2 (FH2) domain profile. 924 1324 IPR015425 -
Lapu2g00934 1337 MobiDBLite consensus disorder prediction 977 991 - -
Lapu2g00934 1337 Pfam C2 domain of PTEN tumour-suppressor protein 197 335 IPR014020 -
Lapu2g00934 1337 MobiDBLite consensus disorder prediction 546 618 - -
Lapu2g00934 1337 MobiDBLite consensus disorder prediction 659 902 - -
Lapu2g00934 1337 Gene3D - 195 340 - -
Lapu2g00934 1337 ProSiteProfiles C2 tensin-type domain profile. 198 337 IPR014020 -
Lapu2g00934 1337 MobiDBLite consensus disorder prediction 477 929 - -
Lapu2g00934 1337 MobiDBLite consensus disorder prediction 407 431 - -
Lapu2g00934 1337 Gene3D Protein tyrosine phosphatase superfamily 14 189 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00934 Lapu-Chr2 8656789 8668111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00934 1 469 FH2 protein (formin) Gene Family AT1G31810 69.427 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00934 - - var:108334847 1022.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00934 2 8656789 8668111 Lapu2g00934 2 8656789 8668111 ECH