Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00929 ATGTTTCAAAGAGTTACACACTTGAACTTGCAAGGACACAAGTTGAAGGGATCCATATCTCCCCATATAGGCAATCTTTCTTTTATGACAGATTTCAACCTTGCAAACAACAGCTTCTATGGAAAAATCCCACAAGAATTAGGATTGTTGTCACAATTACAACAACTCTCTCTCTTAAATAACTCCTTAGAAGGAGAAATTCCTGCAAACTTCACAGGGTGCACTCATCTCACAAGTTTACTCTTGAGTGGGAACAACCTTAATGGAAAAATACCAATTGAAATTGTCTCACTTCAAAAGCTTCAACTTTTGGCCCTTTTCAGGAATCGTTTCACAGGAGGAATCCCATCATTCATAGGAAATATTTCATCTTTGATTCGTCTCTCTGTGTCTACCAACAATTTAGAGGGAGATATTCCACAAGAAATATGTCGTCTAAGAAGCTTGACATTTCTATCACTGGGTGACAACAAACTAAGTGGAACAATTCCTTTGTGTGTTTATAACATGTCTTCTCTTACTGTCATCTCAGCTACAGAAAATCAATTTAGTGGCTCTTTTCCACCCAACATGTTTCACACCCTGTCCAATCTCCAAGTATTTTATTTTAACCTCAATCAAATCTCAGGCTCAATCCCACCATCAATCACAAATGCTTCTAATCTTTCAATATTTGAAATGGGTGGAAACAATCTTACTGGACAAGTTCCAAGTATGGGGAAGCTACAAGATCTTTATTATTTTGTTGTTGATAAAAACTTTCTAGGTGAAAATTCAATTAATGATTTGGAGTTTTTAAAATCATTAACAAATTGTACTAAGTTGAATGTCTTAGATATAGCCTACAATAATTTTGGAGGCCATTTGCCAACTTATTTGGGCAACTTATCCACTCAACTCACTCAACTATATCTTGGAGGTAATCAGATATCTGGAGAAATTCCTGCTGCAATTGGAAATCTAATTGGCTTAAATGTTTTGACAGTGGAATATAACTATGTTAGTGGGAACATCCCAACCACTTTCGGAAAGTTTCAGAAAATGCAGATGTTGAATTTGGGCGCAAACAAGTTGTCAGGAGATATTAAAGCTTGGATAGGCAATCTTAGTCAATTGTTTCATTTGGAAATAGGAGAAAATATGTTACAAGGAAATATTCCACCAAGTGTAGGAAATTGTCAAAAGTTACAATACTTAGACATTTCTGATAACAACCTTACAGGAACCATACCCATGGAGCTTTTTAAGCTTTCATCTCTAACAAACGTGTTGGATTTGTCACAAAACTCATTGAGTGGTAGTATACCAAAAGAAGTGGGCAATGTAAAAAATCTCAATTCATTGTATATGTCTGATAATCATCTCTCAGGTGTCATTCCTGATACCATTGGAGAATGCATAATGTTGGAACAAATCTACTTGCAAGGGAATTCTCTACAAGGAATCATACCATCCTCTTTGGCATCACTCAAAGGACTTCAACATTTAGACCTCTCAAGGAACCAATTGTCTGGATCAATTCCTATTGTTCTGCAGACCATTTCTTTCTTAGAATACTTGAATGTGTCATTTAACATGTTGGATGGTGAGGTGCCAATTGAAGGTGTGTTCCGAAATGCAAGTGAGGTAGTGATTTCTGGAAATAGTGCCCTTTGTGGAGGTATTTCAGAACTACATCTACCGTCATGTCCTGTCAAAGGTAAGAAGCTTTTAAAACACAAGCTCAAGTTGATAATAGTGATGGCTAGTGTGGTTGTTGTTTTTCTCATGTTAGTCATTCTAACTGTCTATTGGATGAGAAAAAAGACTAAAAAAGCATCTTTGGATTCGCCAACAATTAACCTGCTAGCTAAAGTTTCATACCAAAGCCTATACAATGGAACTGATGGGTTCTCAGTTACAAATTTGATAGGGAGTGGGATTTTTAGTTCTGTCTATAAAGGGACTCTTGAGTTAGAAGATAAAGTTGTTGCCATAAAGGTTCTAAACCTTAAAGTTAAAGGATCTCACAAGAGTTTCCTTGTTGAATGTAATGCACTGAGAAGTATTAAACATAGAAATCTGGTTCAGATTTTGACGTGTTGTTCTAGCACAGATTATAAAGGTCAGGAATTTAAAGCTTTAATTTTTGAGTACATGAGAAATGGAAGCTTAGAGCAATGGTTACACCCAAGGACACTAAATGAAGAACATCCAAGATTATTGAGTCTTGATCAGAGATTAAATATCATCATTGATGTGGCTACTGCGTTAAATTATCTTCATTGTGATTGTGAGCCAACAATCATTCATTGTGATTTGAAGCCAAGCAATGTCCTTCTTGATGATTACATGATTGCTCATGTGACTGATTTTGGCATAGCAAGATTTCTCTCAGCTACCAATGGTACCACTTCTAAGCAAACAAGTACAACTGGAATAAAGGGAACTATTGGCTATGCTCCTCCAGAGTATGGAATGAGTTCTGAGGTATCAACTTTTGGGGACATGTATAGCTTTGGAATTCTTGTGTTGGAGATCCTAACAGGCAGAAGACCTACAGATAAAATGTTTGAAGATGGTCTAAATCTTCATAACTTTGTTTCAATTTCATTTCCTAGGAATCTTCTGCAAATTTTGGACCCACGACTTGTTCCAACATATGAGGCAACAACATTAGATGGAAACAACTGGAATCTTAATCGAAATGTTGAAAAATGCATAGTTTCACTTTTTATGATTGGACTTGCTTGTTCTAAAGAATCACCAAAAGAAAGAATGAATGTGGTTGATCTTACCAAGGAGCTTAGTCAAATAAAAAAGGTCTTTCTTACTGGAGAGTCCTGA 2826 0.3613 MFQRVTHLNLQGHKLKGSISPHIGNLSFMTDFNLANNSFYGKIPQELGLLSQLQQLSLLNNSLEGEIPANFTGCTHLTSLLLSGNNLNGKIPIEIVSLQKLQLLALFRNRFTGGIPSFIGNISSLIRLSVSTNNLEGDIPQEICRLRSLTFLSLGDNKLSGTIPLCVYNMSSLTVISATENQFSGSFPPNMFHTLSNLQVFYFNLNQISGSIPPSITNASNLSIFEMGGNNLTGQVPSMGKLQDLYYFVVDKNFLGENSINDLEFLKSLTNCTKLNVLDIAYNNFGGHLPTYLGNLSTQLTQLYLGGNQISGEIPAAIGNLIGLNVLTVEYNYVSGNIPTTFGKFQKMQMLNLGANKLSGDIKAWIGNLSQLFHLEIGENMLQGNIPPSVGNCQKLQYLDISDNNLTGTIPMELFKLSSLTNVLDLSQNSLSGSIPKEVGNVKNLNSLYMSDNHLSGVIPDTIGECIMLEQIYLQGNSLQGIIPSSLASLKGLQHLDLSRNQLSGSIPIVLQTISFLEYLNVSFNMLDGEVPIEGVFRNASEVVISGNSALCGGISELHLPSCPVKGKKLLKHKLKLIIVMASVVVVFLMLVILTVYWMRKKTKKASLDSPTINLLAKVSYQSLYNGTDGFSVTNLIGSGIFSSVYKGTLELEDKVVAIKVLNLKVKGSHKSFLVECNALRSIKHRNLVQILTCCSSTDYKGQEFKALIFEYMRNGSLEQWLHPRTLNEEHPRLLSLDQRLNIIIDVATALNYLHCDCEPTIIHCDLKPSNVLLDDYMIAHVTDFGIARFLSATNGTTSKQTSTTGIKGTIGYAPPEYGMSSEVSTFGDMYSFGILVLEILTGRRPTDKMFEDGLNLHNFVSISFPRNLLQILDPRLVPTYEATTLDGNNWNLNRNVEKCIVSLFMIGLACSKESPKERMNVVDLTKELSQIKKVFLTGES* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00929 941 FunFam LRR receptor-like serine/threonine-protein kinase EFR 264 569 - -
Lapu2g00929 941 Pfam Leucine rich repeat 469 527 IPR001611 GO:0005515
Lapu2g00929 941 Pfam Leucine rich repeat 395 455 IPR001611 GO:0005515
Lapu2g00929 941 SUPERFAMILY Protein kinase-like (PK-like) 607 929 IPR011009 -
Lapu2g00929 941 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 263 - -
Lapu2g00929 941 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672|GO:0006468
Lapu2g00929 941 ProSiteProfiles Protein kinase domain profile. 631 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00929 941 Gene3D Ribonuclease Inhibitor 254 570 IPR032675 -
Lapu2g00929 941 ProSitePatterns Protein kinases ATP-binding region signature. 637 660 IPR017441 GO:0005524
Lapu2g00929 941 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 713 941 - -
Lapu2g00929 941 PRINTS Leucine-rich repeat signature 396 409 - -
Lapu2g00929 941 PRINTS Leucine-rich repeat signature 490 503 - -
Lapu2g00929 941 SUPERFAMILY L domain-like 298 553 - -
Lapu2g00929 941 PANTHER OS04G0122200 PROTEIN 145 934 - -
Lapu2g00929 941 FunFam LRR receptor-like serine/threonine-protein kinase EFR 601 712 - -
Lapu2g00929 941 Gene3D Transferase(Phosphotransferase) domain 1 713 937 - -
Lapu2g00929 941 SMART serkin_6 631 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00929 941 Gene3D Phosphorylase Kinase; domain 1 613 712 - -
Lapu2g00929 941 Pfam Protein kinase domain 632 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00929 941 SMART LRR_typ_2 490 513 IPR003591 -
Lapu2g00929 941 SMART LRR_typ_2 50 73 IPR003591 -
Lapu2g00929 941 SMART LRR_typ_2 442 466 IPR003591 -
Lapu2g00929 941 SMART LRR_typ_2 195 219 IPR003591 -
Lapu2g00929 941 SMART LRR_typ_2 298 321 IPR003591 -
Lapu2g00929 941 SMART LRR_typ_2 369 393 IPR003591 -
Lapu2g00929 941 SMART LRR_typ_2 146 170 IPR003591 -
Lapu2g00929 941 SUPERFAMILY L domain-like 2 254 - -
Lapu2g00929 941 Gene3D Ribonuclease Inhibitor 2 252 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00929 Lapu-Chr2 8587850 8591199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00929 3 937 Receptor kinase-like Gene Family AT3G47570 44.620 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lapu2g00929 Pkinase 2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00929 - - gmx:102664380 1297.34