Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00915 ATGATCAGCACAGGGTACGTGATGCTACTTTCTTCTGATACAGTTGCTGCATCTTTAGTGCACTTGTACAAGTACAACTTAATTAAGGAAGTTGGTGATGGGACGTTTGGGAGTGTCTGGAGAGCCATAAACAAACAAACTGGTGAAGTTGTTGCTATCAAGAAGATGAAGAAGAAGTATTACTCCTGGGAGGAGTGTGTAAATCTAAGAGAAGTCAAGTCATTACGAAAAATGAACCACCCAAATATTGTCAAGCTGAAGGAAGTTATCCGAGAAAGTGACATTTTGTACTTTGTTTTTGAATACATGGAATGCAACCTGTACCAGCTTATGAAAGATAGGGAAAAACTGTTTTCTGAAGGTGAAGTTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTACATGCACCAGCGTGGATACTTCCATCGTGACCTTAAGCCTGAAAACTTGCTGGTTACCAAGGATATGATCAAAATTGCAGATTTTGGCCTAGCCCGAGAGATCAGTTCACAACCGCCCTACACTGAATATGTCTCCACACGATGGTACCGTGCTCCTGAAGTGCTGCTTCAGTCTTATATGTATACCTCTAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAGCTTTTCTCTCTTCGTCCCCTTTTCCCAGGTGTCAGTGAAGCAGATGAGATATACAAAATATGTGGTGTGATAGGCAATCCAACCCATGAATCTTGGGATGATGGACTCAAACTTGCAAGGGATATTAACTACCAATTTCCGCAGCTTGCCGGTGTGCATCTTTCTGCACTGATCCCGTCTGCAAGCGATAATGCAATCAGGCTTATCACATCACTTTGCTCCTGGGATCCCTGCAAGAGGCCAACAGCTTCCGAGGCCCTTCAGCATCCTTTCTTTCAGAGTTGCTTCTATATTCCTCCATCCCTTCGCAGCAGAGCAGTGGCGAGAACTCCACCATCCGCTGGAACCAGAGGAGCCCTGGATCAGCAAGGGGTCAAGAGATATGCCGGTGCTTTACCTAATTCAAAGCTCACCAATAATTTTTCTTCCCTGAAATTACATCCTCCTTTAGCTTCAGACCGAGGTTCTCATCCAATTAAGAATGTTACAGGTGTGCAACGGAAGCTGGATATGGTAAATCAGGATGGAGTTAAGAACGAAAAACCTATGAGGACTATTAAACCAAAATGTCGACAGCCAGGAAAGGACAGCCCAACTTCTATGAACAAGGGGAGGTGTGGACGCGGGGTTGCAGAAACTGCTGAGAAATTGGGGAATTTGTCTGTTAGTACTCGAAGACAATCAATGGGGCAACCCCGTCCTCCACCAATGAAGGCTGGAGTGAATTGGATTTGTGAGTCTGGAAACTTCATCCTTGGGTCGGCCCCGCAGATTCAGAGTGGAAGAACTTTCACCAGAAAAGTTGCTGGATGA 1449 0.4479 MISTGYVMLLSSDTVAASLVHLYKYNLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKLFSEGEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDMIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYMYTSKVDMWAMGAIMAELFSLRPLFPGVSEADEIYKICGVIGNPTHESWDDGLKLARDINYQFPQLAGVHLSALIPSASDNAIRLITSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRSRAVARTPPSAGTRGALDQQGVKRYAGALPNSKLTNNFSSLKLHPPLASDRGSHPIKNVTGVQRKLDMVNQDGVKNEKPMRTIKPKCRQPGKDSPTSMNKGRCGRGVAETAEKLGNLSVSTRRQSMGQPRPPPMKAGVNWICESGNFILGSAPQIQSGRTFTRKVAG* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00915 482 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Lapu2g00915 482 Pfam Protein kinase domain 25 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00915 482 SMART serkin_6 25 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00915 482 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 350 - -
Lapu2g00915 482 FunFam cyclin-dependent kinase F-4-like 22 104 - -
Lapu2g00915 482 ProSiteProfiles Protein kinase domain profile. 25 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00915 482 CDD STKc_MAK_like 25 304 - -
Lapu2g00915 482 Gene3D Transferase(Phosphotransferase) domain 1 105 310 - -
Lapu2g00915 482 SUPERFAMILY Protein kinase-like (PK-like) 20 308 IPR011009 -
Lapu2g00915 482 Gene3D Phosphorylase Kinase; domain 1 15 104 - -
Lapu2g00915 482 FunFam serine/threonine-protein kinase MAK isoform X1 105 314 - -
Lapu2g00915 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00915 Lapu-Chr2 8451315 8459921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00915 24 311 Core Cell Cycle Gene Families AT3G48750 37.162 7.38e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Lapu2g00915 Pkinase 2e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00915 K08829 - gmx:100810150 843.188