Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00911 ATGAGCGTTCCTCCGCCGTCTGCGGCGGCGATGTGGACGCCGTTCACAGCGGCCCAGTGGCACGAGCTGGAGCACCAGGCCCTCATCTTCAAGTACCTCAAGGCGGGGCTCTCCGTTCCCCCCGACCTCCTTCTACCCATTCGCAAGAGCCTTCAATTCATGGCACACCCATCTCTTGGGGGGTACTATGGGAAGAAGATAGACCCTGAACCGGGTCGGTGCCGGAGAACCGATGGGAAGAAGTGGAGGTGTTCGAGGGATGCTCACCCTGACTCCAAGTACTGCGACCGCCATATGATACGACGTCGTTACCGTTCAAGAAAGCCTGTGGAATCTCAACCTCACTCTTCTTCTGCTTCTTCAAACCCTGTTGCTGCTTCTGCTTCTGCTGCTTCCTCTGCAACTGGTTCGGCTGCTTCCTCTGCAACTGGTTCTGCTTCTGCATCTGCAACAACCCTTCACACCCTTCCCTTGCATACCAATGGTGCTCGGGAGGGTTTCACTTTCACCCTTGGGAACAGCGCCACCACCGCCACCCCCACACTCCCCCACCTTCACATGGACCCCCTCACTCTTTCAGGTGACAACACCAAGAAAACTTACAGGTTTGGACTGAACTCAGAAGCAGATGAGCATGTATTACAGAAAGATCTGGGAAGTATGAGGTATCAAGGTTATGACTTCACCTCAGACAGCATGTGGTCTCATGTGTCTCCAATCCCATCAAATACGGTTTCAGAATCAAGAAGTGGTTCTACCATGCTGGGCAACTGCTTCCAACAGCAAACAATGCGAGATGCTGAGCTGTTGAACCTGGAAACTGCAAGGACCAAAGACCTCATGTTTAGTAGCCAGTTAAGTTCAACAGGGAGTTTGAAACAGGAATATCAGTCTCCTCAGTCTCTCTTCAGTGACTGGGACTGGAAGAAGGATTTAAGTTCCTCTGCAATTGAGTATAGACCCAACAAGGATTTTAACTGCAATCCAGATGTCAATGTTGATTAA 1005 0.5134 MSVPPPSAAAMWTPFTAAQWHELEHQALIFKYLKAGLSVPPDLLLPIRKSLQFMAHPSLGGYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESQPHSSSASSNPVAASASAASSATGSAASSATGSASASATTLHTLPLHTNGAREGFTFTLGNSATTATPTLPHLHMDPLTLSGDNTKKTYRFGLNSEADEHVLQKDLGSMRYQGYDFTSDSMWSHVSPIPSNTVSESRSGSTMLGNCFQQQTMRDAELLNLETARTKDLMFSSQLSSTGSLKQEYQSPQSLFSDWDWKKDLSSSAIEYRPNKDFNCNPDVNVD* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00911 334 SMART QLQ_2 13 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lapu2g00911 334 MobiDBLite consensus disorder prediction 68 124 - -
Lapu2g00911 334 Pfam QLQ 14 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lapu2g00911 334 Pfam WRC 69 111 IPR014977 -
Lapu2g00911 334 ProSiteProfiles QLQ domain profile. 14 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lapu2g00911 334 PANTHER GROWTH-REGULATING FACTOR 5 13 306 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lapu2g00911 334 ProSiteProfiles WRC domain profile. 68 112 IPR014977 -
Lapu2g00911 334 MobiDBLite consensus disorder prediction 68 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00911 Lapu-Chr2 8420947 8424685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00911 14 111 GRF Transcription Factor Family AT3G13960 59.633 7.40e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lapu2g00911 WRC 2.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00911 - - gmx:100809947 536.954