Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00903 ATGGAGGGTGGAGGAAGAGAAAGTTATAATGGAGTGGTGATGACTATGACACGAGACCCGAAGCCAAGGCTAAGATGGACAGCAGATCTTCATGATCGCTTTGTGGATGCAGTCACAAAGCTTGGTGGCCCCGATAAAAACGACATTAATCTGAAATGGTTTGTTTTGTGTTCAGAGGCGACTCCCAAGTCTGTGCTGAGGTTAATGGGGATGAAAGGTCTGACGCTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAGCAGGCTCGAAAACAAAGTGAGGAACTGAACAAAGAGAACAGATGCTCGTTTGTAAATTTTAGTAATCGTTCCTCAGGGCCTAACACCAGTTACAGAGGTGATAATGAAGGGGGAGAAATCCCAATAGCAGAAGCACTGAGGCATCAGATTGAGGTTCAAAAGAGATTGGAAGAGCAGCTGGAGGTACAGAAGAAGTTACAGATGAGAATAGAGGCTCAAGGGAAGTATCTGCAAGCAGTGTTAGAGAAAGCTCAGAGAACCCTTTCCTTGGATGGATCAGGAAGTCTTGAAGCATCAAGAGCTCAGCTGACTGAATTCAACTCTGCTTTGTCAAATTTCATGGAAAATATGAATAAAGATAGCAAAGAAAACATAATAGAAGTGACTGATTTTTATAATAAGAACCATGGTTCAGCTTTCCATTATGAGGAAGTGGGGAGAGAACAAAATAGGGATCAAAAGCCCAAGGTTGAAGGGGGTTCAATACAGTTTGACTTAAACATCAAGGGTAGCAGTGACCTTGTATCTGCAGGTGGGGCTGAAATGGATGTCAATATGATTTCATACAGAGGATAA 846 0.4232 MEGGGRESYNGVVMTMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKNDINLKWFVLCSEATPKSVLRLMGMKGLTLYHLKSHLQKYRLGQQARKQSEELNKENRCSFVNFSNRSSGPNTSYRGDNEGGEIPIAEALRHQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQAVLEKAQRTLSLDGSGSLEASRAQLTEFNSALSNFMENMNKDSKENIIEVTDFYNKNHGSAFHYEEVGREQNRDQKPKVEGGSIQFDLNIKGSSDLVSAGGAEMDVNMISYRG* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00903 281 Coils Coil 133 163 - -
Lapu2g00903 281 NCBIfam myb-like DNA-binding domain, SHAQKYF class 21 89 IPR006447 GO:0003677
Lapu2g00903 281 Gene3D - 20 91 - -
Lapu2g00903 281 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 223 IPR044848 GO:0003700
Lapu2g00903 281 Pfam Myb-like DNA-binding domain 24 87 IPR001005 -
Lapu2g00903 281 Pfam MYB-CC type transfactor, LHEQLE motif 131 177 IPR025756 -
Lapu2g00903 281 SUPERFAMILY Homeodomain-like 21 91 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00903 Lapu-Chr2 8348397 8351502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00903 12 202 G2-like Transcription Factor Family AT3G24120 50.754 5.58e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu2g00903 Myb_DNA-binding 5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00903 - - gmx:100810146 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00903 2 8348397 8351502 Lapu2g00903 2 8348397 8351502 ECH