Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00894 ATGGTAGATAGTTCAGTATCGTTTTTACTGGACAAGCTGGATTCTTTACTTCAAGACGAAGTGAATCTGCAGAGAGGGGTTCGTGAAGATGTTCAGCACATCAAATATGAACTTGAGCGTCACCAGGCCATCTTGAGGATGGCTGATGCTATGGAGGACAAAGACCCTGAACTCAAAGCATGGGTTAAACGAGTGAGAGATATTGCTCATGACATGGAAGACGCTATAGATGAATTCAACCTTCTCCTTGTTGATCAACATGGGCAAGGCAACAATTCTTCCTTTCATAGGCTTATTTTCGGCCTTAAGACCGTGAAAGCTCGGCGTAGAATTGCTTTAGATATGCAAAGTATCAAATCCAAAGTGAACCTTATATCCCAGGGACGTCCAGACTTACCTGGGATAGGCTCAAGGTCAAGTCAACGGATGTCATCAATGCTTGACAGCCAAGGAGATGCACTCTTGCTAGAAGAAGCTGATCTGGTGGGTATTGACAAACCCAAAAGGCAGCTTTGTGATTTTCTTTTCAATGAAGAACCAGGTAGGGCTGTGATTCCAATTTATGGAATGGGAGGGTTGGGGAAAACCACCTTGGCAAAACAAGTCTATGATGATCCAAAAGTGCAGAAGCGTTTCGGGATTCATGCTTGGATTAATGTTTCTCAGTCTTTTAAGCTGCAAGAGCTCCTTAAAGACCTGGTTCAACAGCTCCATAATGTCATTGGCAAACCAGCTCCAGAAGCAGTAGGGCAAATGAAAAGTGAGGAGCTCAAAGAGATGATCAAGAACTTGCTTCAGAGAAGCAGGTACTTCATTGTGCTGGATGATGTGTGGCATGTAAAGGTGTGGGATTCTGTCAAACTTGCTTTGCCGAATAACAACCGTGGAAGTAGAGTGATGATTACAACACGCAAAAAAGATATAGCTTTGTATTCTTGTGCTGAACTGGGTAAGGATTTTGACCTTGAATTCTTACCTGAGGAAGAAGCTTGGTATCTTTTCTGCAAGAAAACATTTCAGGGAAACTCATGCCCTCCTCATCTGGAGGAAGTTTGCAGGAAGATCTTAAAAATGTGTGGTGGGTTGCCACTAGCAATTGTGGCAATTGGTGGTGCTTTGGCTACGACAGGGAGGGCAAACATAGAAGAGTGGCAGATGGTTTGCAGAAGTTTTGGGTCTGAAATTGAAGGCAATGACAAACTTGAGGATATGAAGAAAGTGCTTTCCCTAAGTTTCAACGAGTTGCCTTACTATCTTAAATCCTGTTTGCTGTACCTAAGCATGTTCCCTGAGTTTCATGCTATTGAGCGTATGAGATTAATTCGCTTGTGGATTGCTGAAGGTTTTGTGAATGCAGAAGATGGAAAGACAAGGGAGGAAGTTGCAGACAGTTACCTCAAGGAGCTCTTGGACAGAAGTCTACTGCAAGTTGTAGCAAAAACCAGTGATGGCAGGATGAAGACTTGTCGCATGCATGATCTTCTGAGGGAGATTGTCACTTTGAAAGCAAAGGATCAAAACTTTGCAACAATAGCCAAAGATCAAGACATAATCTGGCCAGACAAAGTTCGACGCCTGTCAATCATAAACACATTGCATAACGTACAACAAAATAGGGCTTCATTCCAACTCCGGTCTCTGCTAATGTTTGCCTTATCAGATTCACTGGAGCATTTTTCTATACGTGCATTATGTCCCACTGGTTATAAGTTAATCAGGGTGTTAGATTTGCAGGATGCACCTTTGGAGGTTTTTCCTGCTGAAATTCTCAGCCTTTACCTTCTTAAGTATCTGAGTCTGAAGAATACAAATGTGAAAAGCATTCCAGGTGCCATTAAGAAGCTGCAGCAGCTGGAGACACTAGATCTTAAACAATCCCATGTCAGTGAATTGCCAGTTGAAATTGTGGAGCTGCAACGATTACGCCATCTCTTGGTGTATCGCTATGAGATTGAATCCTATGCTTATTTCCATTCAAGGCACGGCTTCAAAGTGGCAGCCTCTATAGGACTTATGCAATCTTTGCAAAAGCTATGTTTTATAGAGGCAGACCAGGCTTTGATGGTTGAGCTAGGAAAACTCACTCAACTCAGGAGGCTTGGCATTAGAAAGATGAGGCAACAAGATGGTGCTGCTTTGTGTTCATCCATTGAGAAGATGGTCAATCTCCGCTCATTGTCCATCACAGCAATTGAAGGTGATGAGATAATTGATATTCACAACATTTTCAGGCCTCCTCCATATCTCCAGCAGTTATACTTAAGTGGACGTTTAGACAATTTTCCCCAATGGATAAGTTCTCTTAAGAACTTGGTCCGAGTGTTTCTAAAATGGAGCAGGCTAAGAGAGGATCCTCTGGTACATCTTCAAGATTTGCCAAATCTAAGACACCTCGAGTTTCTTGAAGTTTATGTAGGTGAGACATTGAATTTCAAGGCTAAGGGGTTTCCCAGTCTGAAGGTGTTAGGCCTTGATGATTTAGGTGAACTGAAATCTATGACTGTGGAGGAGGGAGCAATGCCTGGTCTTAAAAAGCTCATCATCCAGCGCTGTCGTTCACTGAAGCAGGTACCTTTAGGCATTGAACATCTAACAAAACTTAAATCAATTGAGTTTTTTGACATGCCTGAAGAATTGATCACAAGACTGCATCCAAGTGGAGGTGAAGATTATCCGAGAGTACAACAAGTTCCAGCAGTTTATTCCTCATATTGGAGGGATGGAGGTTGGGATGTATACTCATTAGAGACCTTGGCAGAGCGAGAGACTGATTTCAGTCGCAGTACTGCAGTGAGAAGTCTTGAAATTTGCACTCTCTGGAAGGTTTAA 2829 0.4267 MVDSSVSFLLDKLDSLLQDEVNLQRGVREDVQHIKYELERHQAILRMADAMEDKDPELKAWVKRVRDIAHDMEDAIDEFNLLLVDQHGQGNNSSFHRLIFGLKTVKARRRIALDMQSIKSKVNLISQGRPDLPGIGSRSSQRMSSMLDSQGDALLLEEADLVGIDKPKRQLCDFLFNEEPGRAVIPIYGMGGLGKTTLAKQVYDDPKVQKRFGIHAWINVSQSFKLQELLKDLVQQLHNVIGKPAPEAVGQMKSEELKEMIKNLLQRSRYFIVLDDVWHVKVWDSVKLALPNNNRGSRVMITTRKKDIALYSCAELGKDFDLEFLPEEEAWYLFCKKTFQGNSCPPHLEEVCRKILKMCGGLPLAIVAIGGALATTGRANIEEWQMVCRSFGSEIEGNDKLEDMKKVLSLSFNELPYYLKSCLLYLSMFPEFHAIERMRLIRLWIAEGFVNAEDGKTREEVADSYLKELLDRSLLQVVAKTSDGRMKTCRMHDLLREIVTLKAKDQNFATIAKDQDIIWPDKVRRLSIINTLHNVQQNRASFQLRSLLMFALSDSLEHFSIRALCPTGYKLIRVLDLQDAPLEVFPAEILSLYLLKYLSLKNTNVKSIPGAIKKLQQLETLDLKQSHVSELPVEIVELQRLRHLLVYRYEIESYAYFHSRHGFKVAASIGLMQSLQKLCFIEADQALMVELGKLTQLRRLGIRKMRQQDGAALCSSIEKMVNLRSLSITAIEGDEIIDIHNIFRPPPYLQQLYLSGRLDNFPQWISSLKNLVRVFLKWSRLREDPLVHLQDLPNLRHLEFLEVYVGETLNFKAKGFPSLKVLGLDDLGELKSMTVEEGAMPGLKKLIIQRCRSLKQVPLGIEHLTKLKSIEFFDMPEELITRLHPSGGEDYPRVQQVPAVYSSYWRDGGWDVYSLETLAERETDFSRSTAVRSLEICTLWKV* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00894 942 PRINTS Disease resistance protein signature 359 373 - -
Lapu2g00894 942 PRINTS Disease resistance protein signature 184 199 - -
Lapu2g00894 942 PRINTS Disease resistance protein signature 264 278 - -
Lapu2g00894 942 PRINTS Disease resistance protein signature 613 629 - -
Lapu2g00894 942 FunFam Probable disease resistance protein At1g61300 152 316 - -
Lapu2g00894 942 Gene3D Ribonuclease Inhibitor 532 897 IPR032675 -
Lapu2g00894 942 FunFam Probable disease resistance protein At1g63360 412 501 - -
Lapu2g00894 942 Gene3D - 324 411 IPR042197 -
Lapu2g00894 942 Pfam Rx N-terminal domain 6 96 IPR041118 -
Lapu2g00894 942 Gene3D - 149 314 IPR027417 -
Lapu2g00894 942 Gene3D - 412 502 IPR036388 -
Lapu2g00894 942 Gene3D - 5 112 - -
Lapu2g00894 942 PANTHER DISEASE RESISTANCE PROTEIN RP 33 854 IPR044974 GO:0006952
Lapu2g00894 942 CDD RX-CC_like 3 122 IPR038005 -
Lapu2g00894 942 Pfam NB-ARC domain 166 413 IPR002182 GO:0043531
Lapu2g00894 942 SUPERFAMILY L domain-like 490 877 - -
Lapu2g00894 942 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 426 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00894 Lapu-Chr2 8264327 8267487 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00894 184 378 WRKY Transcription Factor Family AT5G45050 26.020 1.02e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00894 K13457 - gmx:100305458 1634.77